3M6A,4YPL


Conserved Protein Domain Family
RecA-like_Lon

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cd19500: RecA-like_Lon 
Click on image for an interactive view with Cn3D
lon protease homolog 2 peroxisomal
Lon protease (also known as Lon peptidase) is an evolutionarily conserved ATP-dependent serine protease, present in bacteria and eukaryotic mitochondria and peroxisomes, which mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Lon protease is both an ATP-dependent peptidase and a protein-activated ATPase. This RecA-like Lon domain subfamily belongs to the RecA-like NTPase family which includes the NTP binding domain of F1 and V1 H(+)ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. The RecA-like NTPase family also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Statistics
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PSSM-Id: 410908
Aligned: 42 rows
Threshold Bit Score: 290.614
Created: 27-Nov-2017
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
ATP bindinghexamer
Conserved site includes 10 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:3M6A; Bacillus subtilis Lon with bound ADP, contacts at 4A
    View structure with Cn3D
  • Comment:contains Walker A and Walker B motifs

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 ##                                                                   
3M6A_A      72 LKEAGRLLDeeHHGLEKVKERILEYLAVQKLtks---------------------------------------------- 105  Bacillus subtili...
Q2V573     383 LARAREQLDadHYGMESAKERILEYLAVLNLhnqkqprhepefvygt--------------------------------- 429  Ogataea angusta
B9WEC4     588 LKLAKKQLDddHYGLEHVKKRLIQYLVVLKLlginaekdqsdksqpikdnskdspnssskaltksptsslsrktissivi 667  Candida dublinie...
Q31FD3     391 LGRARKILNkgHDGLDDVKDRILEFLAVGALkge---------------------------------------------- 424  Thiomicrospira c...
Q9Z9F4     350 LKKAEIVLNkdHYGLDEIKQRILELISVGKLskg---------------------------------------------- 383  Chlamydia pneumo...
A8XFM8     462 LSHAKKALDegHYGMKDVKERIMEFIAVNLLrks---------------------------------------------- 495  Caenorhabditis b...
NP_649133  503 LEKATETLNddHYGMEDIKKRILEFIAVSSLkgs---------------------------------------------- 536  fruit fly
P93655     421 VARAQTILDedHYGLSDVKERILEFIAVGRLrgt---------------------------------------------- 454  thale cress
NP_602805  306 LKKASQILErdHYGLKDAKEKVLDYLAVKKLnps---------------------------------------------- 339  Fusobacterium nu...
Q59185     346 LQKSKKILDktHYGMNEVKDRIIEYISVLKLrkt---------------------------------------------- 379  Borrelia burgdor...
Feature 1                                                             #######                  
3M6A_A     106 --------------------------------------------lkgPILCLAGPPGVGKTSLAKSIAkslgrKFVRISL 141  Bacillus subtili...
Q2V573     430 -------------------------------gdepttkerpastlkaPILLLTGPPGVGKTSLARSIAttlgrKFQRISV 478  Ogataea angusta
B9WEC4     668 ankdetylakqqakttnqksiteaktnpsttmitsnesihvsknnksPIIMLAGPPGTGKTSLAKSIAsalgrNFQRISL 747  Candida dublinie...
Q31FD3     425 --------------------------------------------isgSIICLVGPPGVGKTSIGRSIAdtlgrKFYRFSV 460  Thiomicrospira c...
Q9Z9F4     384 --------------------------------------------lkgSIICLVGPPGVGKTSIGRSIAkvlhrKFFRFSV 419  Chlamydia pneumo...
A8XFM8     496 --------------------------------------------vggKILCFHGPPGVGKTSIAKSIAnalnrEYFRFSV 531  Caenorhabditis b...
NP_649133  537 --------------------------------------------tqgKILCFHGPPGVGKTSIAKSIAralnrEYFRFSV 572  fruit fly
P93655     455 --------------------------------------------sqgKIICLSGPPGVGKTSIGRSIAralnrKFFRFSV 490  thale cress
NP_602805  340 --------------------------------------------mngVILCLSGPPGIGKTSLVKSIAesmgrKFVRVSL 375  Fusobacterium nu...
Q59185     380 --------------------------------------------qkgAIILLVGPPGVGKTSIGAAIAkvlrtKFFRFSV 415  Borrelia burgdor...
Feature 1                                                                                      
3M6A_A     142 ggvrdESEIRGhrrtyvgamPGRIIQGMKKagklnPVFLLDEIDkmss--------dfrgDPSSAMLEVLdPEQNSSFSD 213  Bacillus subtili...
Q2V573     479 gglndFADLKGhrrtyvgaiPGLIVQALRRsqsmnPVILLDEVDkigsn-------srkgDPEAALLEILdPEQNTNFHD 551  Ogataea angusta
B9WEC4     748 ggikdESEIRGhrrtyvgamPGLLIQALRKsrcmnPVILLDEIDkviggnnsggvnkfngDPSAALLEVLdPEQNNTFID 827  Candida dublinie...
Q31FD3     461 ggmrdEAEIKGhrrtyigamPGKFVQALKDcetanPVIMLDEIDkigs--------syqgDPASALLEVLdPEQNSEFMD 532  Thiomicrospira c...
Q9Z9F4     420 ggmrdEAEIKGhrrtyigamPGKMVQALKQsqamnPVIMIDEVDkiga--------syhgDPASALLEVLdPEQNKDFLD 491  Chlamydia pneumo...
A8XFM8     532 ggmtdVAEIKGhrrtyvgamPGKMIQCMKKvktenPLVLIDEVDkigga-------gfhgDPASALLELLdPEQNANFND 604  Caenorhabditis b...
NP_649133  573 ggmtdVAEIKGhrrtyvgamPGKLIQCLKKtkienPLVLIDEVDkigk--------gyqgDPSSALLELLdPEQNANFLD 644  fruit fly
P93655     491 ggladVAEIKGhrrtyvgamPGKMVQCLKSvgtanPLVLIDEIDklgr--------ghagDPASALLELLdPEQNANFLD 562  thale cress
NP_602805  376 ggvrdEAEIRGhrrtyvgsmPGKIMKAMKEagtnnPVMLLDEIDkmsn--------dfkgDPASAMLEVLdPEQNKNFED 447  Fusobacterium nu...
Q59185     416 ggmrdESEIKGhrrtyvgalPGKIIQGLRItktnsPVFLIDEVDkisa--------ssygDPFSVLLEVLdPEQNVRFRD 487  Borrelia burgdor...
Feature 1                                             #
3M6A_A     214 HYIEETFDLSkvLFIATANnlaTIPGPLRDRMEIINIAGY 253  Bacillus subtilis subsp. subtilis str. 168
Q2V573     552 HYIGFPIDLSqiLFVCTSNdlwQLSDPLRDRMEVIELAGY 591  Ogataea angusta
B9WEC4     828 HYLGFPIDLSqvIFICTANdpwNMTRPLLDRLETIEIGAY 867  Candida dubliniensis CD36
Q31FD3     533 HYMDVRFDLSktLFVCTANtldSIPGPLLDRMEVIRLSGY 572  Thiomicrospira crunogena XCL-2
Q9Z9F4     492 HYLDVRVDLSnvLFILTANvldTIPDPLLDRMEILRLSGY 531  Chlamydia pneumoniae
A8XFM8     605 HFLDVPVDLSrvLFICTANeisKIPGPLRDRMEMIDVSGY 644  Caenorhabditis briggsae
NP_649133  645 HYLDVPVDLSrvLFICTANvidTIPEPLRDRMELIEMSGY 684  fruit fly
P93655     563 HYLDVTIDLSkvLFVCTANvidMIPNPLLDRMEVISIAGY 602  thale cress
NP_602805  448 HYIDMPFDLSkvFFVATANdlrNVSAPLRDRMDILQLSSY 487  Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Q59185     488 HYLDLPFDISnvFFILTANsveTIPRPLLNRMEIIEISGY 527  Borrelia burgdorferi B31

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