4DT1,4EQ6,5XYN


Conserved Protein Domain Family
Psy3

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cd19480: Psy3 
Shu complex subunit Psy3
Psy3, together with Shu1, Shu2, and Csm2, form the Shu complex which is thought to play a role in maintaining genome stability by linking error-free PRR to homologous recombination (HR).
Statistics
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PSSM-Id: 410888
Aligned: 10 rows
Threshold Bit Score: 229.974
Created: 16-May-2012
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
heterodimer
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:heterodimer interface [polypeptide binding site]
Evidence:
  • Structure:4DT1; Saccharomyces cerevisiae psy3-csm2 complex, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                               ##                       
4DT1_B         5 EVLKNIRIYPLSNFITSTk-NYINLPnelrnlis-----eeqesklgFLHIIESDFKPSVALQKLVNCTTg--------- 69  Saccharomyces c...
CAR26335       2 DVLAHCRVYPISNFYHAVp-QSLTLPscigs------------hcvsFVHLIEHNFKFTPFKRQIWNQCIecsv----nd 64  Zygosaccharomyc...
XP_447008      2 EILKHCRIYPISSFCATTe-TYFKIPedlvnqhl-----alrtrklgHIHVVEHSFRLSKVKKKLITTNLde-------n 68  [Candida] glabrata
XP_003678449  15 DVLAHCRVYPLSNFYHPSp-QSITLPntlisntd------ndkphigLLHLIEHDFKMSNFKKQLFNHLTts-------- 79  Naumovozyma cas...
XP_003684198   2 DVLKNCRVYKLSSFKNPTe-QFIKLEkneinitnnpvslslildkikYLHLIEHEFKLSNFKCSLAQSCIknlqadgkgn 80  Tetrapisispora ...
CCH58606       2 EILKNCKIYPLSKFYKPNy-QYYQLPpgikpnen------ldtskisKLHLIEYGFEITPLKRSLLTTMLmme------d 68  Tetrapisispora ...
XP_003645288   2 DIVYRCKVYPLDRFLKPHlyTLNWLPelsvdd---------krkpvrFLHIVEKSMGLLDRWKASFLRQLldq-----nd 67  Eremothecium cy...
CCF56046       2 DVLANCRIYPLSNFLKPKr-NAINLEglninnsnd---itinnnesqSLHLIEHSFRKSKFKEQLVSNNF---------- 67  Kazachstania af...
4EQ6_B        16 EVLKNIRIYPLSNFITSTk-NYINLPnelrnlis-----eeqesklgFLHIIESDFKPSVALQKLVNCTTg--------- 80  Saccharomyces c...
5XYN_A         4 EVLKNIRIYPLSNFITSTk-NYINLPnelrnlis-----eeqesklgFLHIIESDFKPSVALQKLVNCTTg--------- 68  Saccharomyces c...
Feature 1                 ###                                                   # #  #           
4DT1_B        70 dEKILIIDIVSIWsqqk-------------------------------------qrqhGAIYMNSLscINITGLIVFLEL 112 Saccharomyces c...
CAR26335      65 gSSILVIDIISEWkkiiq------------------------------------ensqGVHYMNSTsiCNMEGLQNFLMQ 108 Zygosaccharomyc...
XP_447008     69 sGLILLIDVISCWkqfars---------------------------------lvnngqSIAYLSSAslCQFDGLLNFLGQ 115 [Candida] glabrata
XP_003678449  80 nASYLIIDITSTWkrflls---------------------------------sssasaSLMYMNSTsiLSFEGLINYLVQ 126 Naumovozyma cas...
XP_003684198  81 eKCILVIDIISAWkkyllnkeyiasdvkgssysetdgettshensqipepdstennevGVYYLNSSdiLNMEGILKFFSK 160 Tetrapisispora ...
CCH58606      69 vGNVLIIDIVSIWlgtiemm--------------------------------nmkqkkKINYLNCI--SNIKELNNFLSQ 114 Tetrapisispora ...
XP_003645288  68 pATVLVIDAISIWsrmlp-----------------------------------hksesQVHYLNNPsiLQFSGLVGFLAQ 112 Eremothecium cy...
CCF56046      68 -EHIIIIDIISIWqd------------------------------------------dKFNVINSI--YTFNELINFLTK 102 Kazachstania af...
4EQ6_B        81 dEKILIIDIVSIWsqqk-------------------------------------qrqhGAIYMNSLscINITGLIVFLEL 123 Saccharomyces c...
5XYN_A        69 dEKILIIDIVSIWsqqk-------------------------------------qrqhGAIYMNSLscINITGLIVFLEL 111 Saccharomyces c...
Feature 1                                           #                                       #   #
4DT1_B       113 LYDSPMDALRRcqvd-----nfnfQLRGIVIDNLSFLnfesdknydvinlskFEKLFKILRKLREFLGCWIITKSFPTDF 187 Saccharomyces c...
CAR26335     109 LQASPLEALQRclikd----rldkQISGIIIDNLSYLahd---------lssYSALIKILKQLRRTFGCWILTIGYGLEY 175 Zygosaccharomyc...
XP_447008    116 LIDSPDEALKRciftds-ysclqqPLTGIIIDNLSYYqtpv-------amreFSALQKMLKSLRSTFGCWTMTTSYGLEY 187 [Candida] glabrata
XP_003678449 127 LNDHPTTALQRslsinneplqltlPLSGIIIDNLSYLpqd---------ppqFKILTNILKLLRKSLGCWIMTTSYGLEY 197 Naumovozyma cas...
XP_003684198 161 LNENPIETLEKychfpk-tvnfkqQLSGIIVDNISYFahdnhmn-iqqntahYSTLLNMFKTLRKTFGCWVISVSYGMEF 238 Tetrapisispora ...
CCH58606     115 LIETPIVALRRcqqfenvdeviqrRLDGIFIDNVSYLqdfnedq--kgnsqmYDELNKMIRKVREVFGCWVVSISYGNEY 192 Tetrapisispora ...
XP_003645288 113 LCESPDLALRSrcdih---asldaPLKTVILDNLSAYyfqe--------nasLETLRKLLETLHATLGCAVVTFGYGIEY 181 Eremothecium cy...
CCF56046     103 FNDSPLATLSEygi-------smdTVEGIMIDNLSYIgnln--------nksIVILIKILKLIQINFGCFILSTSYGLEY 167 Kazachstania af...
4EQ6_B       124 LYDSPMDALRRcqvd-----nfnfQLRGIVIDNLSFLnfesdknydvinlskFEKLFKILRKLREFLGCWIITKSFPTDF 198 Saccharomyces c...
5XYN_A       112 LYDSPMDALRRcqvd-----nfnfQLRGIVIDNLSFLnfesdknydvinlskFEKLFKILRKLREFLGCWIITKSFPTDF 186 Saccharomyces c...
Feature 1          ###                                     
4DT1_B       188 YNGIEntlvdkwsikrksgvtlyptKLPDSYMKGMDLIIYRE 229 Saccharomyces cerevisiae S288c
CAR26335     176 YDGVEnststpn-------rtgaltKLPASYINEMDVIILRE 210 Zygosaccharomyces rouxii
XP_447008    188 YNGVEggtstlyt-----ssgtsftRLPVSYIKDTDLVLMRD 224 [Candida] glabrata
XP_003678449 198 NQGIEntists--------asnsntYIPLNYTKEMDIVLLHE 231 Naumovozyma castellii CBS 4309
XP_003684198 239 YDGVElstssiy-------rsgshtRVPINYTSGMDTILLRD 273 Tetrapisispora phaffii CBS 4417
CCH58606     193 YEGVEgclnvk---------shsisGVPISFLNGMDMIVLRE 225 Tetrapisispora blattae CBS 6284
XP_003645288 182 YEGVDntyptrps----eikgpwptRLDYSYLKAMDSVLVFT 219 Eremothecium cymbalariae DBVPG#7215
CCF56046     168 YEGIEnfqrmkn------lnlkyptLLPMNYLLEMDTILLRE 203 Kazachstania africana CBS 2517
4EQ6_B       199 YNGIEntlvdkwsikrksgvtlyptKLPDSYMKGMDLIIYRE 240 Saccharomyces cerevisiae S288c
5XYN_A       187 YNGIEntlvdkwsikrksgvtlyptKLPDSYMKGMDLIIYRE 228 Saccharomyces cerevisiae S288c

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