1G6O,1P9R,2PT7


Conserved Protein Domain Family
type_II_IV_secretion_ATPases
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cd19477: type_II_IV_secretion_ATPases 
type II/type IV hexameric secretion ATPases
RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H(+)ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Links
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Statistics
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PSSM-Id: 410885
Aligned: 3 rows
Threshold Bit Score: 199.157
Created: 29-May-2012
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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ATP binding
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:1G6O; Helicobacter pylori type IV secretion ATPase with bound ADP, contacts at 4A
    - View structure with Cn3D
  • Comment:contains Walker A and Walker B motifs
Download Cn3D for Viewing 3D StructureScroll to Sequence Alignment Display
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Feature 1                       ########                                                      
1G6O_A    162 SAIKDGIAig-knVIVCGGTGSGKTTYIKSIXEFIpk-eERIISIEDTEEIvfkhhkNYTQLFFggn--itsADCLKSCL 237 Helicobacter pylori
1P9R_A    157 DNFRRLIKrphgiILVTGPTGSGKSTTLYAGLQELnsseRNILTVEDPIEFdi---dGIGQTQVnprvdxtfARGLRAIL 233 Vibrio cholerae
2PT7_A    162 SAIKDGIAig-knVIVCGGTGSGKTTYIKSIMEFIpk-eERIISIEDTEEIvfkhhkNYTQLFFggn--itsADCLKSCL 237 Helicobacter pylor...

Feature 1                                                                                     
1G6O_A    238 RXrPDRIILGELRs-SEAYDFYNVLCSGHkGTLTTLHAGssEEAFIRLANXsssnsaarnikfesLIEGFKDLIDXIVHI 316 Helicobacter pylori
1P9R_A    234 RQdPDVVXVGEIRdlETAQIAVQASLTGH-LVXSTLHTNtaVGAVTRLRDXg------------iEPFLISSSLLGVLAQ 300 Vibrio cholerae
2PT7_A    238 RMrPDRIILGELRs-SEAYDFYNVLCSGHkGTLTTLHAGssEEAFIRLANMsssnsaarnikfesLIEGFKDLIDMIVHI 316 Helicobacter pylor...

Feature 1                                                                  
1G6O_A    317 NHhkq------------------------------------------------cdEFYIKH 329 Helicobacter pylori
1P9R_A    301 RLvrtlcpdckepyeadkeqrklfdskkkeplilyratgcpkcnhkgyrgrtgihELLLVD 361 Vibrio cholerae
2PT7_A    317 NHhkq------------------------------------------------cdEFYIKH 329 Helicobacter pylori 26695

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