5XUA,5XUB,6ITS


Conserved Protein Domain Family
MCP2201-like_sensor

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cd19411: MCP2201-like_sensor 
Click on image for an interactive view with Cn3D
ligand-binding sensor domain of Comamonas testosteroni CNB-2 MCP2201 and similar chemoreceptors
This family includes the ligand-binding sensor domain of Comamonas testosteroni transmembrane chemoreceptor CNB-2 MCP2201 and similar chemoreceptors. The C. testosteroni methyl-accepting chemotaxis protein MCP2201 triggers chemotaxis towards tricarboxylic acid cycle intermediates such as citric acid and aromatic compounds. While the apo-form ligand binding domain (LBD) forms a typical four-helix bundle homodimer, similar to other chemoreceptors in the superfamily such as Escherichia coli Tar and Tsr, the citrate-bound LBD reveals a four-helix bundle homotrimer. This type of oligomerization has never been observed in other bacterial chemoreceptor LBD. Site-directed mutations of key amino acid residues have demonstrated the physiological importance of the homotrimer for chemotaxis.
Statistics
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PSSM-Id: 438629
Aligned: 704 rows
Threshold Bit Score: 51.4845
Created: 13-Oct-2021
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 23 residues -Click on image for an interactive view with Cn3D
Feature 1:homodimer interface [polypeptide binding site]
Evidence:
  • Structure:Comamonas testosteroni chemoreceptor MCP2201 ligand binding domain forms a homodimer, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #  ##  ## ##  ##  ## ##  ####             ##                               
5XUA_A         8 MMQEPLTKERLISDWNSNVSVAVARTTAIAKSSDAsl--------vqFLAADAAATTKSTANVLKQIEPlit--qpAERE 77  Comamonas testo...
WP_068609233  46 VHAHRMAISEALATLLRNYYDNRLHVLLAFQHAPDsptralhdhptsMHLDVVKQQRESNNQALKTIESmlpqmddEEQR 125 Tepidimonas sp....
OGB48807      43 LHDEAMHRALLADQSIDLTVQNRLQVLLAFQHAPEsvlasihshptnMHLEAIATNRAKANELQKAMEQgit--dpEEKK 120 Burkholderiales...
OGS72848      52 VYEDRLIGAVRLAEVNYLQAENQRQVHLMLMHDPRlpesvlhdhplsFHTDKMAENTKKNNKSWEGFLAtaq--tpEGKN 129 Gallionellales ...
PZN05266      44 IKERNVVKMKNATSIADNAQSNMQIVAEMMISQDYgh--------ieKLAEQMNANRAENAKLLKELDGlve--epEEMP 113 Proteobacteria ...
SEJ78925      48 LYEDRLVPVKLINGIRTDIAKANTALLELMITEDDsk--------nkELKKAIDDIAGNTNTVYGQLDKmkm--daKGQE 117 Propionispira a...
SCN36149      45 MYEDSLLPIQWIGSIKSNFYLINMNVKEIMLSKDEkr--------mkELMTEIDRSRTDTDELLKKFETrvs--snKEKE 114 Bacillus wiedma...
PWB58818     201 VYEQRTVPMNQISNIQKLLLTNRLRIAVSLVSPTPea--------iqKNAAEVEQNIAEITRIWDVYAAtpl--apEEKT 270 Nitrosomonadale...
WP_010966050  45 MYEIDMKRTNILYELKTNVNDIKADTNLILKSTNEvk--------sdNIIDKIAKLVKEDDRLIYNYKKviv--meKDKE 114 Clostridium
WP_010966049  45 IYNVDMKGTNILYQIRGYVIEVRADILLIMDPMNKsk--------idSIVGDIDDIVQKDNELIKEYKTtif--tdEDRT 114 Clostridium
Feature 1                                            #                     #  ##      
5XUA_A        78 ILDKIMQVRKTYIASRDKVSQLKADGma-eEAESTLINSYVPAAQGYLKLLGELLNLQRASLDAKAAEV 145 Comamonas testosteroni CNB-2
WP_068609233 126 LYQAVMDARKAWQAKRDQALEALRAEnfgaEVMQAFLAAGRTEGAAFEAAMQKLRDLQHRRADEEANAA 194 Tepidimonas sp. AT-A2
OGB48807     121 LLDATQAHRQAWRAKLDGVTAAIAKGdfnpEIMAGFLAAGRAEGEAVVKSMAAFRDHQVKRANAAYQDA 189 Burkholderiales bacterium ...
OGS72848     130 LADEFIAKRKAYQAARNKALALIKAGny-lEANSVVVKEAGPAYMGNTAAMQNLLMLQIDLSKREYDNA 197 Gallionellales bacterium G...
PZN05266     114 LYDKLKADRQTFIEKRNEVIDLLRASrf-eEAMHVYMNALLPVVEAYKQSLDKFSAYQERRIDEQSAEM 181 Proteobacteria bacterium
SEJ78925     118 LFANIKTATANFRNVRSKVLDLALQNkn-aEAYALYEKDVYPASIAFAKSLDDFADYYSNLSEQMKVDS 185 Propionispira arboris
SCN36149     115 LYTTFHKLFKELRTQLKKVQVLGQSNe--eEAYAYYLKEADPIMKKAVQAIEELIMYNNHNAEQLKKNN 181 Bacillus wiedmannii
PWB58818     271 LADKFAGDRKEFVAEGLKPAIAALRAndiaLANKIIVDKVRPLYEPVGDGIQKLMQYQLDGAKHEYEAA 339 Nitrosomonadales bacterium
WP_010966050 115 LFSEFEVNLKKWRASRNKVISYVVAGey-eAAIKEFDSTTSHYSDIMLNKLNLYIDYSKDITIYNYGDI 182 Clostridium
WP_010966049 115 LFYQFLDNLAKWRQSREKVIAYAKAGdy-mSASVEFKTHTTPYRNAALQKLDADIKYNAKVAKNDYSSS 182 Clostridium

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