3ATP,1VLT,4Z9H,2D4U,2ASR,1LIH,1VLS,1JMW,2LIG,1WAT


Conserved Protein Domain Family
Tar_Tsr_sensor

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cd19407: Tar_Tsr_sensor 
Click on image for an interactive view with Cn3D
ligand binding sensor domain of Tar- and Tsr-related chemoreceptors
Escherichia coli Tar (taxis to aspartate and repellents) and Tsr (taxis to serine and repellents) are homologous transmembrane chemoreceptors that have a high specificity for aspartate and serine, respectively. Both are homodimeric receptors and contain an N-terminal periplasmic ligand binding domain, a transmembrane region, a HAMP domain and a C-terminal cytosolic signaling domain. E. coli Tar mediates bacterial chemotaxis toward attractants, including aspartate (Asp) and maltose, and away from repellents such as nickel and cobalt ions. Tsr has many roles, including sensing of external (serine, leucine) and internal (pH) environments. In Salmonella enterica serovar Typhimurium, Tsr, also called methyl-accepting chemotaxis protein (MCP), is involved in sensing host-derived nitrate in murine intestinal epithelium, thus contributing to invasion of Peyer's patches. This model represents the ligand binding domain of Tar and Tsr.
Statistics
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PSSM-Id: 438625
Aligned: 111 rows
Threshold Bit Score: 45.0054
Created: 16-Jul-2018
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
ligand bindinghomodimer
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:ligand binding site [chemical binding site]
Evidence:
  • Structure:1VLT; Salmonella enterica aspartate receptor ligand binds aspartatic acid, contacts at 4A
  • Structure:3ATP; Escherichia coli serine chemoreceptor Tsr ligand binding domain binds serine, contacts at 4A
  • Comment:Arg residues from both monomers form the ligand binding pockets
  • Comment:The dimer binds two ligands
  • Citation:PMID 1660187
  • Citation:PMID 8345523
  • Citation:PMID 8831788

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                         #    #   #                                                  
3ATP_A     24 QTIRQQQSTLNGSWVALLQTRNTLNRAGIRYMMdqnnigs---------gstvaeLMESASISLKQAEKNWADYEAlprd 94  Escherichia coli s...
1VLT_A     10 NELRQQQSELTSTWDLMLQTRINLSRSAARMMMdasnqq----------ssaktdLLQNAKTTLAQAAAHYANFKNmtpl 79  Salmonella typhimu...
CBJ41072   45 AMQLAGAVALAESDASMLSFRLVLDRAAMDLKApsl-----------------gkTLERARMFLAKSDASWKRYRAlpst 107 Ralstonia solanace...
ADM43184   18 QLQADELGPLSTGFSATLRARSAAAVAARQLTLehia--------------dadsSRRTVEALLTESNDIMAQFSAlkkv 83  Edwardsiella tarda...
EFV84252   51 KQSQELNDALGRVVSSYKDSLNGLGRAASANYAdivrsvgqptvltqglsseaagLLERAKASQNKGQAEFDYFKTlpkp 130 Achromobacter xylo...
EFV86256   45 NVAVHQVDPLYEASGALLRARLALGAGIADLQAgaad--------------qaatAESAAASQLQQARERFTRYMAvpks 110 Achromobacter xylo...
EGB59461   54 TAEIEIRTGLANSSDFLRSARINMIQAGAASRIaeme--------------amkrNIAQAESEIKQSQQGYRAYQSrpvk 119 Escherichia coli M863
EGD01187   45 HVDLPAIHTLDDTSSYLLRARVSLDRFRSLTEAgnta--------------eagkVLDRAQELYTKSNQNWQVFQAtpkl 110 Burkholderia sp. T...
CBX72225   45 QIQGEELGSLSNSFTATLSARTEAALAIHQLEIglid--------------eslqTAKQAEESLALSQKEMARFVSavse 110 Yersinia enterocol...
CCA86809   47 LEDAKGLDLLARDTVNLLWARIHLTNFDSVSSPeel-----------------akLLKDAHAMVNAANEAWAAFTKlplp 109 Ralstonia syzygii R24
Feature 1                                             ## # #                   
3ATP_A     95 prqstaaAAEIKRNYDIYHNALAELIQLLGa----gKINEFFDQPTQGYQDGFEKQYVAYMEQND 155 Escherichia coli str. K12 substr....
1VLT_A     80 p-amaeaSANVDEKYQRYQAALAELIQFLDn----gNMDAYFAQPTQGMQNALGEALGNYARVSE 139 Salmonella typhimurium
CBJ41072  108 p-derklADEADALRTVFLRDGAEVLMQAIqagdaeRTGKTVMEAMPALYRPLGDQVTALSRMQM 171 Ralstonia solanacearum CMR15
ADM43184   84 tvegqrlSARLEQSYNAYIQDGLQPMVQALaarnldTYYALLENQVSSHSTEYDRDLREFRQFAD 148 Edwardsiella tarda FL6-60
EFV84252  131 a-eaadsLKEVEESYGALVQQGLLPLTAALek---aDMPAYQTQVQKVQDALEGRFARAVEGFDF 191 Achromobacter xylosoxidans C54
EFV86256  111 e-rgqelAQILQGQFNAYVAVLDELDAALKe----rSAARYQQSEPRVRQADAAFAKDMQVFLTR 170 Achromobacter xylosoxidans C54
EGB59461  120 tladealDAELNQRFQAYITGMQPMLKYAKngm-feAIINHESEQIRPLDNAYTDILNKAVKIRS 183 Escherichia coli M863
EGD01187  111 g-iepalVDELAARYATIVKEGVEPEFAAAragdmaAYHAVADTKISPMFVAYDQAASAVIASLQ 174 Burkholderia sp. TJI49
CBX72225  111 rgegqelATNIQKSYKNYVDKGVIPMLTAIkagyadEYYEVLEKSITDISKAFNNDVATFRSYAL 175 Yersinia enterocolitica W22703
CCA86809  110 e-adraqLQAAEAARTKFVKTALEPAITALersdltTYRDLNTTQVPQLFVVYDAALQPLVKARF 173 Ralstonia syzygii R24

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