2RD3,3IBX


Conserved Protein Domain Family
TenA_C_HP1287-like

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cd19361: TenA_C_HP1287-like 
TenA_C proteins similar to Helicobacter pylori TenA (HP1287
This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. This family includes Helicobacter pylori TenA (HP1287) protein which is thought to catalyze a salvage reaction in thiamin metabolism, however its pyrimidine substrate has not yet been identified. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. HP1287 may contribute to stomach colonization and persistence.
Statistics
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PSSM-Id: 381696
Aligned: 46 rows
Threshold Bit Score: 261.36
Created: 12-May-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
conserved
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: conserved active site residues [active site], 3 residue positions
Conserved feature residue pattern:E C EClick to see conserved feature residue pattern help
Evidence:
  • Comment:these proteins have a conserved active site Cys residue, and 2 conserved Glu residues in the active site; the Cys is thought to act as a nucleophile in the thiaminase reaction, Glu are thought to interact with the substituent at the 5-position of the pyrimidine ring

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                       #
2RD3_A         9 VSQYLYQNAQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLFLLEYAKVFALGVVKacdEAVMREFSNAIQDILnNE 88  Helicobacter py...
EEI85275       3 FIDYLYEQTKDIWQDLYNHPFIEGLIRGDLEISRFKYYLEEDYIYLWEHVKIFAIGLAKtnnKEIIRKFAYLINNCMeNE 82  Anaerococcus la...
WP_019192655   3 FVDYLYAETIDIWDALYKHPFITGLATGTLPIEKFRYYLAEDYQYLWENVKIFAVAITKtsdKKIIKKYTDLLNQCInYE 82  Firmicutes
PWL47175       3 YSEQLYRQVCSIWQSYETHPFLLGLFDGTLPIEKFRFYMIQDYLYLLDYAKVFALGIAKadsIEEMQFFSQNVHQILhGE 82  Clostridiales b...
SER04119       5 LSDYLLYQVEDLWQGYLEHPFIIGMATGELEERKFSYYLLQDYLYLKEYIKVFAVTLSKaddFSEIKFLLDSMNDIFeET 84  Granulicatella ...
EHL18837       3 LSEILFNSVEHIWNSYLTHPFITKMADGTLEIEKFKYYMLQDYVYLKDYIKVFAVGSTKsdeFDEIKFFCDNMYAVLdET 82  Eubacteriaceae ...
CCX46010       9 LSQRLHACVQDIWPRYLSHPFVTQMADGTLPMEKFRYYMLQDYLYLKDYVKIFAAIIQKaddFEQIRFLSGELANTIgET 88  Firmicutes bact...
EXM38599       4 LSEKLYERAKPLWDKESENEFVAAMAEGTLEEEKYRAYMLQDYFYLIDYIDILEWMHGQaedNEVAEFLKNAADSTRyEK 83  Ruminococcus al...
SDJ05350       3 LSEILLSNVRPFWDEASDKDFVVQMAKGLLNLECFKNYMIQDYLYLFDYIEILKDIKAIs-nNDVSNFLDATIKVVEeEL 81  Lachnospiraceae...
SEQ95456       3 ITDRLYIAAEINWMESAEKPFPLEMAEGTLDDSLFKNYMIQDYLYLQDYIVILKKMLELsndEEVAAFVKNTLDAIEyET 82  Lachnospiraceae...
Feature 1                                                            #                           
2RD3_A        89 MSIHNHYIRELqitqkelqnacptLANKSYTSYMLAEGFKgsIKEVAAAVLSCGWSYLVIAQNLSQIPna-leHAFYGHW 167 Helicobacter py...
EEI85275      83 MAIHRGLMKDFdidikeienrqanLTNLSYSNYRISQSILggYEEILMVLMACDLGYVNIFRHIDRVNpqaknHEVYGKF 162 Anaerococcus la...
WP_019192655  83 MDIHKNLMQDFgcdinridekrpnLTNRSYSNFRLSQALVggYEEILIILMACDWSYVEIFKKLNERYpeaieNDLYGDL 162 Firmicutes
PWL47175      83 MEIHRSYMQRLgisdqdaaqtsihPANYSYTAYMLKEAYQggVPEILAAILACSWSYADIALHLSERYpqaisHPFFGEW 162 Clostridiales b...
SER04119      85 FRVHVPYMKRLgiseeeiqsvqphPSNINYTNDMLLAAQSgdVLDGLVAILSCSWSYAYIARETLKIYptamqDERYGEW 164 Granulicatella ...
EHL18837      83 YKVHIPYMKRLgitekdimnvkphIDNTSYTKYMLYEGQNgnMLSCLIAILSCSWSYAFISKKIVEKNkscleNETYGEW 162 Eubacteriaceae ...
CCX46010      89 FRTHLPYMQRLgvtedeirrarphIDNSAYSHYMLCEAQAgdVLTGLVTLLNCSWSYAYIAQEMAARYpdalqNEHYGAW 168 Firmicutes bact...
EXM38599      84 DTVHIPNMKKLgitddeisvagkaPDSEEYLNYMMGKAREs-LVYGITALLQCSWSYAYIAKKVSDRYgdklkSSPYSEW 162 Ruminococcus al...
SDJ05350      82 KLVHIPNMEKLginvdmikksdqnEVFSEYVSYMKSCVREsgMTAGLIALLQCSWCYAYIAGKVSEKYadeisVSSYREW 161 Lachnospiraceae...
SEQ95456      83 YNVHSANMKALgvtdadvescvrtPVILRYVEYMKNQLEEggLLYGLTALLQCSWNYAILGAVLTERYpdmiaKSKYKSW 162 Lachnospiraceae...
Feature 1                                                     #      
2RD3_A       168 IKGYSSKEFQACVNWNINLLDSLtlassKQEIEKLKEIFITTSEYEYLFWDM 219 Helicobacter pylori
EEI85275     163 ITGYLDPVYLSYVDGTVNEINELskemtKEKMDALIEIFKNCLTYELKFWDM 214 Anaerococcus lactolyticus ATCC 51172
WP_019192655 163 IKGYLNSRWLDYIYDALDEINKIgqnlsASKRESLLELFRSCLTYELKFWDM 214 Firmicutes
PWL47175     163 VAGYASQSYQATNQSLIDRLDIAaahlsKTTLEHLSQIFQACSRYELGFWDM 214 Clostridiales bacterium
SER04119     165 FEGYYCSEYQLGNEELIQHINQLaqgitAEKRERLATIFTNCSQHEMNFWDM 216 Granulicatella balaenopterae
EHL18837     163 FNGYYCKEYQETNEKLIQKVDNLsnnlsQKTIDKLTEIFVNCSIYEAKFWDL 214 Eubacteriaceae bacterium CM5
CCX46010     169 FAGYVSEEYRQTNQALIDRIDALgadidEQTTQHLCEIFQTCCLFDLRFWDM 220 Firmicutes bacterium CAG:103
EXM38599     163 FSAYTSDEYQEANQRWIDILDRVvqdisSAEEEKLCMIFEKCAHYETRFWNI 214 Ruminococcus albus SY3
SDJ05350     162 FEAYTGKAYNDANQAWIDIADKEcmnidKTEIEKMVEIFKECAGYENKIWDE 213 Lachnospiraceae bacterium G41
SEQ95456     163 FDAYTSDEYVGANESWINLVNKQaadlpEEEVEKLCEIFRTCSTFENRFWDA 214 Lachnospiraceae bacterium NE2001

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