Conserved Protein Domain Family
chromodomain

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cd18967: chromodomain 
CHROMO (CHRromatin Organization Modifier) domain; uncharacterized subgroup
The chromodomain is a conserved region of about 50 amino acids, found in a variety of chromosomal proteins. The chromodomain is implicated in the binding, of the proteins in which it is found, to methylated histone tails and maybe RNA. A chromodomain may occur as a single instance, in a tandem arrangement, or followed by a related chromo shadow domain. Chromodomains belong to the chromo-like superfamily of SH3-fold-beta-barrel domains which includes chromo shadow domains and chromo barrel domains. Chromodomains differ from these in that they lack the first strand of the SH3-fold-beta-barrel. This first strand is altered by insertion in the chromo shadow domains, and chromo barrel domains are typical SH3-fold-beta-barrel domains with sequence similarity to the canonical chromo domain.
Statistics
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PSSM-Id: 349323
Aligned: 3 rows
Threshold Bit Score: 110.799
Created: 2-May-2018
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative peptide binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     #####                      # ####   # #### ##     #  ##  
EME45128  610 YEIERILAHHKsdprthpgkpiAMLYQTKWKGYp--DPTWEPANSFtdrkMLHEYQR 664 Dothistroma septosporum NZE10
KJX97200  525 WTVEAIVEHHMsdpkthpgkpaTMLYLTKWEGFp--EETWEPAESFde-sIIKDYRR 578 Zymoseptoria brevis
EMF10442  636 WEIEKILAHHMsdprthpgkpqTMLYRVKWAGFdesQTTWEPKESFpdvdILNAYRR 692 Sphaerulina musiva SO2202

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