Conserved Protein Domain Family
ABC_6TM_MRP4_D2_like

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cd18601: ABC_6TM_MRP4_D2_like 
Six-transmembrane helical domain 2 (TMD2) of multidrug resistance-associated protein 4 (MRP4) and similar proteins
This group represents the six-transmembrane domain 2 (TMD2) of multidrug resistance-associated protein 4 (MRP4), which belongs to the subfamily C of the ATP-binding cassette (ABC) transporter superfamily. The MRP subfamily (ABCC subfamily) is composed of 13 members, of which MRP1 to MRP9 are the major transporters that cause multidrug resistance in tumor cells by pumping anticancer drugs out of the cell. These nine MRP members function as ATP-dependent exporters for endogenous substances and xenobiotics. MRP family can be divided into two groups, depending on their structural architecture. MRP4, MRP5, MRP8, and MRP9 (ABCC4, 5, 11 and 12, respectively) have a typical ABC transporter structure and each composed of two transmembrane domains (TMD1 and TMD2) and two nucleotide domains (NBD1 and NBD2). On the other hand, MRP1, 2, 3, 6 and 7 (ABCC1, 2, 3, 6 and 7, respectively) have an additional N-terminal five transmembrane segments in a single domain (TMD0) connected to the core (TMD-NBD) by a cytoplasmic linker (L0).
Statistics
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PSSM-Id: 350045
Aligned: 15 rows
Threshold Bit Score: 461.405
Created: 10-Dec-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:TM helix 1 [structural motif]
Evidence:
  • Comment:All members of this ABC transporter family contain 6 alpha-helices in each transmembrane domain (TMD) for a total of 12 TM segments in the complete transporter.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1      ############### #########                                                       
O15439     710 HWIVFIFLILLNTAA-QVAYVLQDWWLSYWankqsmlnvt---------------vngggnvteKLDLNWYLGIYSGLTV 773  human
PFX22113   728 NDLVLLLLVVLCVCA-QGVFTLSDWWLSQWsnsqgqdlfvfkf---------vqavmrypmdgeASKHNTHMIIYGGLVT 797  Stylophora pisti...
PFX33082   677 KGMILVLLVIATQCQgERKLAVEGHLLNENnplientadeeerraf--eaetltsnstsqvmylDKLRKQNISIYAGLVV 754  Stylophora pisti...
EDO35250   170 NCCTLVFMSVLFFAA-QGSYTITDWWLAHWsdidykqnll--------------netsgivtqsPYDRRYYIAVYGGLVL 234  starlet sea anemone
EKC26649   600 GPIKFPVLFLLNVIA-QAAYIISDWWLARWanneerrgdmidqda----llrsqgmnntnitipDSQTDFNVYVFSGIIA 674  Pacific oyster
EEN49060   708 GIGGIILAVFLNIAA-QALFIVTDWWMAYWaqeeedyyrathpattl-pingvnttlpnnmtipRVDVNRNIYVLAGTTG 785  Florida lancelet
PIK47382   431 KLFPFIVFMGFNLSC-QVLFVMSDWWLSEWayteetctaqfdddscl-ynstvlseftsfsrveKVGRAFFFYNFAVLLF 508  Japanese sea cuc...
ELT90554   197 GVFGILLCAFLNIAA-SLLYVMCDWWLAVGkqseavlehrrlv--------aeqgpnstltdipEVQNYHNLSILAAITG 267  Capitella teleta
EEN59800   612 GVWGVLLAILLNIAY-QSLYMLTDWWFTYWanqylkegrnvstsssdinltvngtitqanasaaVLDITYYVTVSAALTA 690  Florida lancelet
EDQ84994   548 STPAIIFWIGLCILT-QVAQLLSDWWLSYWvam----------------------------dpeDRGDDINLVIYAVFII 598  Monosiga brevico...
Feature 1                                                                                      
O15439     774 ATVLFGIARSLLVFYVLVNSSQTLHNKMFESILKApvlFFDRNPIGRILNRFSKDIGHLDDLLPLTFLDFIQTLLQVVGV 853  human
PFX22113   798 TTLVLSFLRVLLFFHATVTASVKLHNNMFDAVIRApvfFFDTNPTGRILNRFSSDTAYMDTLIPETFLDFLQLGLLVVAV 877  Stylophora pisti...
PFX33082   755 GTFLLAYASAGAFLFIAVSASQNLHNNMFRKLLGAtiyFFDTNPAGRVLNRFSKDIGQMDDMLPYTFYDYSRLMLQAFAI 834  Stylophora pisti...
EDO35250   235 LTFLLSFIRSFLFFYVKVAASKALHNKMFCAVLRApmyFFDTNPAGRIINRFSKDIGFMDDLLPETFYEFISLAILCFAV 314  starlet sea anemone
EKC26649   675 SVFIFGLLRALMYFKVAVDAAKHLHNKMFRRLLLVpirFFDINPVGRVLNRFSKDTGHMDDNLPITFFDYIQCVLTILGI 754  Pacific oyster
EEN49060   786 ALVLFSIFRSAWMFFLCIKSSQELHDRMFRSVVRApvlFFDSNPVGRILNRFSKDLGHLDDLLPSTLLDVVVIMMQVLGG 865  Florida lancelet
PIK47382   509 LLIVFAFIRTVWLFFICVNASKNLHNQMFAAIIRTpmqFFDTNPIGRILNRFSKDIGFLDELLPITLADFNAIAVQTCAV 588  Japanese sea cuc...
ELT90554   268 SCFLFGLFRSLDVFHILVSASKNIHNDMFASVIRSptkFFDVNPPGRILNRFSKDIGLLDDLLPYSVNEFLVTFLQVIGI 347  Capitella teleta
EEN59800   691 TVLVLSILRAVFLFYMCLSSSRSLHNQMFAAIIRVpilFFDTNPVGRILNRFSKDVGLLDHLLPLNVAEVIQFLMMTVGV 770  Florida lancelet
EDQ84994   599 VFLVTAFSRSIVFMQWAAKASTNISALAFGSVVRTdirFFDINPIGRILNRFSKDMGFIDDLLPVTFFDLLQLSTLITGT 678  Monosiga brevico...
Feature 1                                                                                      
O15439     854 VSVAVAVIPWIAIPLVPLGIIFIFLRRYFLETSRDVKRLESTTRSPVFSHLSSSLQGLWTIRAYKAEERCQELFDAHQDL 933  human
PFX22113   878 VSMNVITMPFILVGVVPLILVFCCLRNYYLKTTREIKRLEGTARSPVLSHLVTTLDGLTSIRSHSLQDVMIHEFNICQDR 957  Stylophora pisti...
PFX33082   835 LMLNVVFMPYLLAAAIPIVALFLFIRYYYLKTAREVKRIEAMNRSPFYSHISTSLQGLTTIRAYRAENRFKNQYDVYQDE 914  Stylophora pisti...
EDO35250   315 VVVNVATMPWVIIGILPLAVAFLFVRSYYLKTSREVKRIEAIGRTPIFNHFSSTLEGLATIRSLSSQTQVTAELAACQDH 394  starlet sea anemone
EKC26649   755 VIVVVVIIPYVFVLLIPILILLYITRRYHIITSRHIKRLEGTTRSPVFSHLSASLQGLHTIRALRVQEKFCEEFDNHQNL 834  Pacific oyster
EEN49060   866 VILAGVINPWVFIPVVPVVLLLVVIRRYYMRTSRDIKRLEATTRSPVFSHLSATLQGLWTIRAFGAQESFQREFHAHQDL 945  Florida lancelet
PIK47382   589 LITICIFNPLILIFTIPLGILFVFIRSYFLATSRDVKRIEGVCRSPVFSHLSSTLQGLTTVRAFHAQRRFVSKFDMYQDV 668  Japanese sea cuc...
ELT90554   348 VLVACVVNPWVLIGVIPLGMIFILLRKFYLQTSRAVKRIEGVARSPALSHLSSTVHGLHTVRAYGVEAVFMEEFHRHQDV 427  Capitella teleta
EEN59800   771 FLLAGIVNPWVFIPSIPIMVTCLVVIRYYLATSRDIKRLEGTTRSPVFSHLSATLQGLWTVRACNAQHICQEAFSAHLDL 850  Florida lancelet
EDQ84994   679 YLLVCALNPWLFIVVPVLAVAFVKVNAYYLATAREVKRLEAVARSPVYSHFSSTLNGLATLRSHSASERFTRLFEEYQNG 758  Monosiga brevico...
Feature 1                                                                                      
O15439     934 HSEAWFLFLTTSRWFAVRLDAICAMFVIIVAFGSlilakt---ldagqVGLALSYALTLMGMFQWCVRQSAEVENMMISV 1010 human
PFX22113   958 HTETWFLFIATSRWLAYRLDFLCMLFVFMASFTPlfiaerg-eidaglVGLCLTYAVLLPGHFQWCVRQSAEVENQMTSV 1036 Stylophora pisti...
PFX33082   915 HTAAWFLFMTGSRWLGARLDFICTVFIASAAFSPlflaeggvfmsagiVGLTLTYAKMLTGGFQWCVRQSAEVENLMTSV 994  Stylophora pisti...
EDO35250   395 HSEAWFLFIATSRWLAIRLEMLCLLFVTMAAFTPlflsrnh-didagvVGLTLSYAVMLTGMFQWCVRMSAEVENQMTAV 473  starlet sea anemone
EKC26649   835 HTESWFLFLSSSRWLAVRLDWMCAIFITVVSFACvflakd---lnaglVGLLMTYAIMLMGLFQWGVRQSAEVESQMISV 911  Pacific oyster
EEN49060   946 HSEAWFLFLAASRWFGIRMDWLAAIFITAVAFCSvlaaqs---ldsglVGLSLSYALILMGGFQWGVRQSAECETLMTSA 1022 Florida lancelet
PIK47382   669 HTESWFAFLATTRLFGIMLDWLVAVFMIIVSFGSvvskdfl-gldaveVGLSLTYALSLMGSFQWGVRQSAEVENLMTST 747  Japanese sea cuc...
ELT90554   428 HSSAWFLFISTMRWFVFHLDTLCAAFITVVTLSSvaaaks---ldgglVGMSVSSALTLMGTFQWAIRQSAEVENLMTSV 504  Capitella teleta
EEN59800   851 QSEAVFLFLAINRWLALRLDVLVALFVVVVAFISvfaaes---ldgglVGLSLSYAIYLTNGFQYAVRLAAEVETLMTSA 927  Florida lancelet
EDQ84994   759 HSRAYSAFVTTSRWLGCRLDAITFTFLAAAVFVTtalrdd---lgssrLGLQISYVLQLTATFQWAVRQSAELENQMTSV 835  Monosiga brevico...
Feature 1             
O15439    1011 ERVIEYT 1017 human
PFX22113  1037 ERIMELC 1043 Stylophora pistillata
PFX33082   995 ERVIEYS 1001 Stylophora pistillata
EDO35250   474 ERVVDYS 480  starlet sea anemone
EKC26649   912 ERVLEYS 918  Pacific oyster
EEN49060  1023 ERIIEYS 1029 Florida lancelet
PIK47382   748 ERVLEYT 754  Japanese sea cucumber
ELT90554   505 ERVSEYC 511  Capitella teleta
EEN59800   928 ERVLTYA 934  Florida lancelet
EDQ84994   836 ERVLEYG 842  Monosiga brevicollis MX1

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