5UJ9,5UJA


Conserved Protein Domain Family
ABC_6TM_MRP1_2_3_6_D1_like

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cd18595: ABC_6TM_MRP1_2_3_6_D1_like 
Click on image for an interactive view with Cn3D
Six-transmembrane helical domain 1 (TMD1) of multidrug resistance-associated proteins (MRPs) 1, 2, 3 and 6
This group represents the six-transmembrane domain 1 (TMD1) of multidrug resistance-associated proteins (MRPs) 1, 2, 3 and 6, all of which are belonging to the subfamily C of the ATP-binding cassette (ABC) transporter superfamily. The MRP subfamily (ABCC subfamily) is composed of 13 members, of which MRP1 to MRP9 are the major transporters that cause multidrug resistance in tumor cells by pumping anticancer drugs out of the cell. These nine MRP members function as ATP-dependent exporters for endogenous substances and xenobiotics. MRP family can be divided into two groups, depending on their structural architecture. MRP4, MRP5, MRP8, and MRP9 (ABCC4, 5, 11 and 12, respectively) have a typical ABC transporter structure and each composed of two transmembrane domains (TMD1 and TMD2) and two nucleotide domains (NBD1 and NBD2). On the other hand, MRP1, 2, 3, 6 and 7 (ABCC1, 2, 3, 6 and 7, respectively) have an additional N-terminal five transmembrane segments in a single domain (TMD0) connected to the core (TMD-NBD) by a cytoplasmic linker (L0).
Statistics
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PSSM-Id: 350039
Aligned: 114 rows
Threshold Bit Score: 275.117
Created: 20-Nov-2017
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:chemical substrate binding site [chemical binding site]
Evidence:
  • Structure:5UJA; Bos taurus multidrug resistance protein 1 (MRP1) bound to one of its physiological substrates, leukotriene C4, contacts at 4A.
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #  #                                             #   #   #                 
5UJ9_A     248 MSFLFKAVHDLMMFAGPEILKLLINfvndkkapEWQGYFYTALLFISACLQTLVLHQYFHICFVSGMRIKTAVIGAVYRK 327  cattle
5UJA_A     248 MSFLFKAVHDLMMFAGPEILKLLINfvndkkapEWQGYFYTALLFISACLQTLVLHQYFHICFVSGMRIKTAVIGAVYRK 327  cattle
CAG03315   322 SGTLCIIFHDAFMFAIPQVLSLLLGfmrdedapLWKGYFYATLMFLLSCLQSLFNHQYMYTCFTVGMRVKTAVMGLVYRK 401  spotted green pu...
OCT64086   324 LSALLMTFYTAFLFISPLLVRLLLNllkdpsapSWQGFLVAVLLFICPCFQSLFLHQHDYICYVIGMRLRAAIVGTVYKK 403  African clawed frog
OWK61924   255 LSTVCLVICDVFLFSTPKVLSLFLKfiedeaapSWLGYFYAFSMFLLGCLQTLFEQRYMYMCLVLGLRLRTAVTGLVYRK 334  Bengalese finch
GAU92895   319 AAFFCRLIHDIFTFFSPVILRWIIGfirdkdkeLWKGYLYAVLLLLSATVQTFGLNLYFFVCSRTGLRLRGALMAAVHRK 398  Ramazzottius var...
OQV17378   309 MSALLRIFNDLSIFVTPQVLRLMIDfvedksqpAWKGYFYAGLMLLGSCAQTLILNQYLHMCLRLGMHIRGSIVAIVYRK 388  Hypsibius dujardini
O95255     313 LGTLSLIISDVFRFTVPKLLSLFLEfigdpkppAWKGYLLAVLMFLSACLQTLFEQQNMYRLKVLQMRLRSAITGLVYRK 392  human
OWA50106   610 KSALAKVFYDAAAIIVPVLVGELIAfvaqvwiwSWRGYVYAALLGIAALMQSIGYANMNFVSTRLGMRVRSALAGMIFRK 689  Hypsibius dujardini
OQV18389   293 YSAALRFSYNIMLFLIPEILRLLINfakdrsaeLWKGYMFAALLLIASIMQSIFVGHCVHQCNRLGLKLRTALMSAVYRK 372  Hypsibius dujardini
Feature 1                                      ##                                              
5UJ9_A     328 ALVItnaarkSSTVGEIVNLMSVDAQRFMDLATYINMiWSAPLQVILALYLLWLNLGPSVLAGVAVMVLMVPLNAVMAMK 407  cattle
5UJA_A     328 ALVItnaarkSSTVGEIVNLMSVDAQRFMDLATYINMiWSAPLQVILALYLLWLNLGPSVLAGVAVMVLMVPLNAVMAMK 407  cattle
CAG03315   402 SLVInsasrrTCTVGEIVNLVSADTQKLMDFVVYFNAvWLAPIEIALCLFFLWQQLGPSALAGIATVIFIFPLNGFIAKK 481  spotted green pu...
OCT64086   404 ALVIssagrkESSAGEIVNLISTDVQKLMDLSTCVNYmWSAPVTIIVAMYFLWQTLGIAVLAGVAVFILNLPFMTAFGVI 483  African clawed frog
OWK61924   335 ILVMsnasrkAATTGEIVNLVSVDVQKLMDLIIYFNGtWLAPIRIIICFVFLWQLLGPSALTAIAVFLFLLPLNFVITKK 414  Bengalese finch
GAU92895   399 SLKItseskrSSNLGEIVNLMSVDAQRINDFMIYVHLlWSALFLILVALYFLYNILGYAVFSGLGLLILTFPLNAWLANR 478  Ramazzottius var...
OQV17378   389 SLRIsssakrSSNIGEMVNLMSVDAQRFMEFMAYVQMlWSGPVQMGLSIYFLYDLLGVPVFAGLGTLLVVFFANAFLVGK 468  Hypsibius dujardini
O95255     393 VLALssgsrkASAVGDVVNLVSVDVQRLTESVLYLNGlWLPLVWIVVCFVYLWQLLGPSALTAIAVFLSLLPLNFFISKK 472  human
OWA50106   690 ALKLsntskrHFPVGDVVNLLTLDVQRICDFLYYHHYvWITPFTILVIMYVLWLFVGVASLAGFFTLVFLIILNFALVGR 769  Hypsibius dujardini
OQV18389   373 VIRVaqfadgTSSIGQPTNLITIDSQRIMDLTQYINQiWEVPLQIVVGTILLYRVLGVSSLAGLGVMIVSVPILGMVAVR 452  Hypsibius dujardini
Feature 1                                                                     #  #             
5UJ9_A     408 TKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFKDKVLAIRQEELKVLKKSAYlAAVGTFTWVCTPFLVALSTFA 487  cattle
5UJA_A     408 TKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFKDKVLAIRQEELKVLKKSAYlAAVGTFTWVCTPFLVALSTFA 487  cattle
CAG03315   482 RSKLQEIQMKFMDGRIRLMNEILNGIKILKFYAWEKAFLEQVLGHREKELRALKKSQIlYSISIASFNSSSFLIAFAMFG 561  spotted green pu...
OCT64086   484 IKRVQEQQMKQKDGRIKIISEILQGIKVLKLYAWENAFMKKVTEFRLQELKAVKTGALlLSGALAVFVASPFWVSLTMFG 563  African clawed frog
OWK61924   415 RSQFQETQMKHKDERAKLTNEILSNIKVIKLYGWEKTFMEKVLGIRKQELQALKRSQIlFSASLVSFHSSTFLITFVMFA 494  Bengalese finch
GAU92895   479 NKVLQLAQMEYKDQRIKLTSEILSGMKILKLYAWEKSFEQQILDIREKEIEQLKKSAYlLTVSAFNWFITPFLVALSIFG 558  Ramazzottius var...
OQV17378   469 SRSLQIVQMKEKDGRIKMMSEILNGIKVLKLYAWEKSFQQQVTDIRERELTTLRKAAYlGALGYFSWILSPFLVAIATFS 548  Hypsibius dujardini
O95255     473 RNHHQEEQMRQKDSRARLTSSILRNSKTIKFHGWEGAFLDRVLGIRGQELGALRTSGLlFSVSLVSFQVSTFLVALVVFA 552  human
OWA50106   770 SKKFEMAAAKQKNNRVRRINEIFNGIKILKMYAWESRFQELIIAEREEELSSINKAGIlLSICNALNFVMSPLAALATYT 849  Hypsibius dujardini
OQV18389   453 IKKLQMTQMASKDQRIRLTGEFFRAIKNLKLYAWEEVYAKQILQHRKDEIRNLKQSAYlQANITAYSIISPFIVGLAVFA 532  Hypsibius dujardini
Feature 1                                 #      #               
5UJ9_A     488 VyvtvdennildaqkAFVSLALFNILRFPLNILPMVISSIVQASVSLKRL 537  cattle
5UJA_A     488 VyvtvdennildaqkAFVSLALFNILRFPLNILPMVISSIVQASVSLKRL 537  cattle
CAG03315   562 VyvmldnrnvldaqkVFVSMALINILKTPLSQLPFAISTTMQAMVSLRRL 611  spotted green pufferfish
OCT64086   564 VflsideknvldaekAFVTIILLNILRIPLRMFPMAITLFVQSSVSLKRM 613  African clawed frog
OWK61924   495 VytlvdnthvldaekAFVSLTLINILNTAHSFLPFSINAAVQAKVSLNRL 544  Bengalese finch
GAU92895   559 TyvlispenvldadkAFVGLALLNILRQPLTMLPSAVTLLIQSRVSIGRL 608  Ramazzottius varieornatus
OQV17378   549 TyilsspanilnpqrAFVALSLLNILRVPLTLLPSAITMATQAAISLKRL 598  Hypsibius dujardini
O95255     553 Vhtlvaen-amnaekAFVTLTVLNILNKAQAFLPFSIHSLVQARVSFDRL 601  human
OWA50106   850 TyvyldtanqltadvAFVTLIFLFSLRHTLFFIPVGATLLVQARIAIQKL 899  Hypsibius dujardini
OQV18389   533 TyvlsdssnildstkAFVAMAIFNILKNSITLLPPTIGIVVQAMVCEGRL 582  Hypsibius dujardini

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