Conserved Protein Domain Family
BTB_POZ_KCNA5

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cd18406: BTB_POZ_KCNA5 
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium voltage-gated channel subfamily A member 5 (KCNA5)
KCNA5, also called HPCN1, voltage-gated potassium channel HK2, or voltage-gated potassium channel subunit Kv1.5, mediates transmembrane potassium transport in excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a tetrameric potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient. KCNA5 may play a role in regulating the secretion of insulin in normal pancreatic islets. Voltage-gated potassium (Kv) channels are composed of alpha subunits, which form the actual conductance pore, and cytoplasmic beta subunits, which are auxiliary proteins that associate with alpha subunits to modulate the activity of the Kv channel. KCNA5 is an alpha subunit that forms functional homo- or hetero-tetrameric channels (with other Kv1/KCNA alpha subunits) through its BTB/POZ domain, also known as tetramerization (T1) domain, which is a versatile protein-protein interaction motif.
Statistics
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PSSM-Id: 349713
Aligned: 6 rows
Threshold Bit Score: 203.177
Created: 14-Sep-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative tetramer interface [polypeptide binding site]
Evidence:
  • Comment:based on the tetramer structure of Rattus norvegicus voltage-gated potassium channel Kv1.2 BTB domain

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #   # ########  #                   #  #   # ## ##  #   #  #   # #   #   ##  # 
P22460       120 QRVHINISGLRFETQLGTLAQFPNTLLGDPAKRLRYFDPLRNEYFFDRNRPSFDGILYYYQSGGRLRRPVNVSLDVFADE 199 human
OPJ80646      27 QRVLINISGLRFETQLGTLNQFPDTLLGDPDKRMRYFDPLRNEYFFDRNRPSFDGILYFYQSGGKLRRPVNVSIDVFTDE 106 Patagioenas fas...
XP_004912856   7 QRVIINIAGLRFETQLSTLNQFPDTLLGDPEKRMRFFDPLRNEYFFDRNRPSFDGILYFYQSGGKIRRPVNVSIDVFADE 86  tropical clawed...
ARD05928     103 ERVLINIAGLRFETQLGTLNQFPYTLLGDPHKRVKYFDPLRNEYFFDRNRPSFDGVLYFYQSGGKIRRPVNVSIDIFADE 182 Mississippi pad...
XP_007902374  31 ERVIVNIAGLKYETQLGTINQFPDTLLGDPQKRMRYFDPLRNEYFFDRNRPSFDGILYFYQSGGKIRRPVNVSIDIFADE 110 elephant shark
XP_006013184 110 EKVIINIAGLRFETQLCTLNQFPDTLLGDPDKRMRYFDPLRNEYFFDRNRPSFDGILYFYQSGGKIRRPVNVSIDVFADE 189 coelacanth
Feature 1                         
P22460       200 IRFYQLGdEAMERFRED 216 human
OPJ80646     107 IRFYQLGeEAMERFRED 123 Patagioenas fasciata monilis
XP_004912856  87 IRFYELGeEAMERFRED 103 tropical clawed frog
ARD05928     183 IRFYELGeEAMEKFRED 199 Mississippi paddlefish
XP_007902374 111 IRFYQLGaEAMERFREE 127 elephant shark
XP_006013184 190 IRFYELGhEAMERFRED 206 coelacanth

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