Conserved Protein Domain Family
BTB_POZ_KCNA4

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cd18405: BTB_POZ_KCNA4 
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium voltage-gated channel subfamily A member 4 (KCNA4)
KCNA4 is also called HPCN2, or voltage-gated K(+) channel HuKII, voltage-gated potassium channel HBK4, voltage-gated potassium channel HK1, or voltage-gated potassium channel subunit Kv1.4. It mediates transmembrane potassium transport in excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a tetrameric potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient. Voltage-gated potassium (Kv) channels are composed of alpha subunits, which form the actual conductance pore, and cytoplasmic beta subunits, which are auxiliary proteins that associate with alpha subunits to modulate the activity of the Kv channel. KCNA4 is an alpha subunit that forms functional homo- or hetero-tetrameric channels (with other Kv1/KCNA alpha subunits) through its BTB/POZ domain, also known as tetramerization (T1) domain, which is a versatile protein-protein interaction motif.
Statistics
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PSSM-Id: 349712
Aligned: 5 rows
Threshold Bit Score: 202.917
Created: 14-Sep-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative tetramer interface [polypeptide binding site]
Evidence:
  • Comment:based on the tetramer structure of Rattus norvegicus voltage-gated potassium channel Kv1.2 BTB domain

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #   # ########  #                   #  #   # ## ##  #   #  #   # #   #   ##  # 
P22459       176 ERVVINVSGLRFETQMKTLAQFPETLLGDPEKRTQYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLKRPVNVPFDIFTEE 255 human
NP_990230    192 ERVVINVSGLRFETQLKTLAQFPETLLGDPAKRGRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLKRPVNVPFDIFSEE 271 chicken
XP_021333542 205 ERVVINVSGLKFETQLKTLAQFPDTLLGDPEKRSRYFDPLRNEYFFDRNRPSFDAILYFYQSGGRLKRPVNVPFDIFSEE 284 zebrafish
XP_005991276 180 ERVVINVSGLKFETQLKTLTQFPETLLGDPEKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLKRPVNVPFDIFSEE 259 coelacanth
OCT83842     195 ERVVINVSGLRFETQLKTLSQFPETLLGDPEKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLKRPVNVPFDIFSEE 274 African clawed ...
Feature 1                         
P22459       256 VKFYQLGEEALLKFRED 272 human
NP_990230    272 VKFYQLGEEAMLKFRED 288 chicken
XP_021333542 285 VKFYELGDEAMLKFRED 301 zebrafish
XP_005991276 260 VKFYELGEEALLKFRED 276 coelacanth
OCT83842     275 VKFYELGEEALLKYRED 291 African clawed frog

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