5D0U,5XDR,2XAU


Conserved Protein Domain Family
DEXHc_DHX15

?
cd17973: DEXHc_DHX15 
Click on image for an interactive view with Cn3D
DEXH-box helicase domain of DEAH-box helicase 15
DEAH-box helicase 15 (DHX15) is a pre-mRNA processing factor involved in disassembly of spliceosomes after the release of mature mRNA. DHX15 belongs to the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Statistics
?
PSSM-Id: 438709
Aligned: 10 rows
Threshold Bit Score: 320.131
Created: 18-Jul-2017
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
 
ATP bindingDEAD box
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:5D0U; Chaetomium thermophilum Prp43 with bound Mg.ADP, contacts at 4A

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                    #                        #######                                    
5D0U_A        26 ERYFKILKARRkLPVNKQRQEFLDLYHnNQILVFVGETGSGKTTQIPQYVLYDElphq------tgkLIACTQPRRVAAM 99  Chaetomium ther...
O22899        53 QRYFEILEKRRdLPVWLQKDDFLNTLNsNQTLILVGETGSGKTTQIPQFVLDAVvadnsd--kgrkwLVGCTQPRRVAAM 130 thale cress
5XDR_A        20 PRYYDILKKRLqLPVWEYKDRFTDILVrHQSFVLVGETGSGKTTQIPQWCVEYMrslp-----gpkrGVACTQPRRVAAM 94  human
2XAU_A        81 PKYVDILKIRReLPVHAQRDEFLKLYQnNQIMVFVGETGSGKTTQIPQFVLFDEmphl------entQVACTQPRRVAAM 154 baker's yeast
NP_001108613  99 PRYYEILKKRLqLPVWEYKERFNDILNrHQSFVLVGETGSGKTTQIPQWCVDMVrslp-----gpkrGVACTQPRRVAAM 173 zebrafish
NP_595937     63 QNYFKILETRReLPVYQQREEFLKIYHeNQIIVFVGETGSGKTTQIPQFVLYDElphl------tntQIACTQPRRVAAM 136 Schizosaccharom...
NP_741148     64 NRYWAIWEKRSqLPVWEYKEKFMELLRnNQCITLVGETGSGKTTQIPQWAVEFMkqqqqgqppgqarLVACTQPRRVAAM 143 Caenorhabditis ...
NP_610269     60 QRYQNLYKKRIaLPVFEYQADFMRLLSlHQCIVLVGETGSGKTTQIPQWCVDFAvsk-------grkGVSCTQPRRVAAM 132 fruit fly
XP_638323     65 KRYYEILEKRKeLPVWKQKEDFIKVIKeNQVVILVGETGSGKTTQIPQFVVDAGlir-------pgkMVGVTQPRRVAAI 137 Dictyostelium d...
XP_001352047 155 QRYLQLLEEKKkLPAWSAKKNFLKLLKkNNVLIIVGDTGSGKTTQISQFVLESKyte--------kkSIAVTQPRRVAAM 226 Plasmodium falc...
Feature 1        #   #                                                       ##                  
5D0U_A       100 SVAQRVADEldvklgeEVGYSIRFENKTSsktLLKYMTDGQLLREAmhdrdmsrySCIILDEAHERTlatDILMALLKQL 179 Chaetomium ther...
O22899       131 SVSRRVADEmdvsigeEVGYSIRFEDCTSsrtMLKYLTDGMLLREAmadplleryKVIILDEAHERTlatDVLFGLLKEV 210 thale cress
5XDR_A        95 SVAQRVADEmdvmlgqEVGYSIRFEDCSSaktILKYMTDGMLLREAmndplleryGVIILDEAHERTlatDILMGVLKEV 174 human
2XAU_A       155 SVAQRVAEEmdvklgeEVGYSIRFENKTSnktILKYMTDGMLLREAmedhdlsrySCIILDEAHERTlatDILMGLLKQV 234 baker's yeast
NP_001108613 174 SVAQRVADEmdvmlgqEVGYSIRFEDCSSaktILKYMTDGMLLREAmndplleryGVIILDEAHERTlatDILMGVLKEV 253 zebrafish
NP_595937    137 SVAKRVADEmdvdlgeEVGYNIRFEDCSGpntLLKYMTDGMLLREAmtdhmlsrySCIILDEAHERTlatDILMGLMKRL 216 Schizosaccharom...
NP_741148    144 SVATRVAEEmdvvlgqEVGYSIRFEDCISertVLKYCTDGMLLREAmnsplldkyKVLILDEAHERTlatDILMGLIKEI 223 Caenorhabditis ...
NP_610269    133 SVAQRVSEEmdvklgeEVGYSIRFEDCSTaktLLKYMTDGMLLREAmsdpmldqyQVILLDEAHERTlatDILMGVLKEV 212 fruit fly
XP_638323    138 SVAKRVSEEmdfelgeEVGYSIRFEELSSartFMKYLTDGMLLRESmsdptlnkyDVIILDEAHERTlstDILFGLIKDI 217 Dictyostelium d...
XP_001352047 227 SVAARVSEEldvelgtYVGYTIRFEDKSSnktIIKYLTDGMLLRESmsdplltkyNTIILDEAHERTlatDILFGVIKNI 306 Plasmodium falc...
Feature 1                                         
5D0U_A       180 SErrkdLKIIVMSATldAQKFQSYFfnaPLLAV 212 Chaetomium thermophilum var. thermophilum DSM 1495
O22899       211 LRnrpdLKLVVMSATleAEKFQEYFsgaPLMKV 243 thale cress
5XDR_A       175 VRqrsdLKVIVMSATldAGKFQIYFdncPLLTI 207 human
2XAU_A       235 VKrrpdLKIIIMSATldAEKFQRYFndaPLLAV 267 baker's yeast
NP_001108613 254 VRqrsdLKVIVMSATldAGKFQVYFdncPLLTI 286 zebrafish
NP_595937    217 ATrrpdLKIIVMSATldAKKFQKYFfdaPLLAV 249 Schizosaccharomyces pombe 972h-
NP_741148    224 VRnradIKVVIMSATldAGKFQRYFedcPLLSV 256 Caenorhabditis elegans
NP_610269    213 IRqrsdLKLVVMSATldAGKFQQYFdnaPLMKV 245 fruit fly
XP_638323    218 LKrrkdLKLIVMSATleAGKFQKYFenaPLIKV 250 Dictyostelium discoideum AX4
XP_001352047 307 QEkrndLKLIVMSATldAEKFQKFFnnsKILNI 339 Plasmodium falciparum 3D7

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap