Conserved Protein Domain Family
futalosine_nucleosidase_MqnB

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cd17766: futalosine_nucleosidase_MqnB 
futalosine nucleosidase which catalyzes the hydrolysis of futalosine to dehypoxanthinylfutalosine and a hypoxanthine base; similar to Thermus thermophiles MqnB
Futalosine nucleosidase (MqnB, EC 3.2.2.26, also known as futalosine hydrolase) functions in an alternative menaquinone biosynthetic pathway (the futalosine pathway) which operates in some bacteria, including Streptomyces coelicolor and Thermus thermophiles. This domain model belongs to the PNP_UDP_1 superfamily which includes members which accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. PNP_UDP_1 includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). Superfamily members have different physiologically relevant quaternary structures: hexameric such as the trimer-of-dimers arrangement of Shewanella oneidensis MR-1 UP, homotrimeric such as human PNP and Escherichia coli PNPII (XapA), homohexomeric (with some evidence for co-existence of a trimeric form) such as E. coli PNPI (DeoD), or homodimeric such as human and Trypanosoma brucei UP. The PNP_UDP_2 (nucleoside phosphorylase-II family) is a different structural family.
Statistics
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PSSM-Id: 350166
Aligned: 101 rows
Threshold Bit Score: 156.542
Created: 6-Jul-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative active
Feature 1:putative active site [active site]
Evidence:
  • Comment:based on the structures of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases with bound substrate analogs
  • Comment:the neighboring subunit contributes residue(s) to the protein-ligand interaction

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #                                                            #            
Q39Q81         3 SIIIAAAtslelsl-------lvrsigaREVRRkk----------gfSDTYRGKVggtTVLLAVTgIGKANTASALTALL 65  Geobacter metal...
jgi:Dde_3188  17 MTLIITTattremeavlkgfngrgrvgcVLPRQg-------------EVCASPVNe-rQCLLAVTgVGPVNAAFTLGRLL 82  Desulfovibrio a...
SCY66303       3 PILILAAvhaelapml----arldspepMNIAG--------------RTAFTATMgnkKLIALVGgPGAVNTAQALTAAI 64  Desulfoluna spo...
AQU99777      31 YVLIAAAvdgelaglr----rrmnawveDEIGR--------------RPVARGRLlgvPVRLMVTgPGTANTVQALTAVL 92  Desulfococcus m...
OQY11737       6 YILIAGAvinelsgii----eqieehkhFYIGG--------------KKIVSGNIgeqPVKIILTgPGIINCVHALTAVI 67  Desulfobacterac...
ETR74636       7 SILIIAAvsheikpvm----drlnnpqkRIIGG--------------RNVLCGKLfnhSVIAVVSgIGMLNAAQAATSVI 68  Candidatus Magn...
KPA11559       8 SILILAAvyeelepll----sklsnsksLSIGR--------------KKAFTGKIseqSVIIVQCgIGIVNAVQALTAAV 69  Candidatus Magn...
WP_012174701   5 RILILTAtpvea-----------aplvdRISGAna-----------aGNRVTGMLggtPVRVLVPgPGPVNTAMALTAVM 62  Desulfococcus o...
OSZ82190       2 DILLIAAteaeiapl------akliannKVSGS--------------ETAYHFAWg--RLVVCVAgVGMVATAYALTKQL 59  Chitinophagacea...
SKA80262       1 MLLCVFAt-------------------dKECAAalpemhtvpaqgqwLPHVRANH---ELTVLITgVGPLNAAMHLGRCL 58  Desulfovibrio b...
Feature 1                      ###                                                               
Q39Q81        66 ERYt--PRLLIDTGCAGAYGGggLAVGDLAVASTEVYGDEGi-LTPSGWe---sLEIIGIPQLEr--------------- 124 Geobacter metal...
jgi:Dde_3188  83 GEHr-nIDGVISLGIAGTFDPdaAPLGSTVLATRETWADYGl-YTAQGVd----PMGIGFGQTDdavn------------ 144 Desulfovibrio a...
SCY66303      65 EHLs--PSLIVQTGCAGGFAEagVSVGDVAVATEEIDIHMG--LEADTEeksvrLAPLPFALMEr--------------- 125 Desulfoluna spo...
AQU99777      93 EHIp--PHLILLTGCAGAFRQsgLGIGDVGVADEEIDAHLG--LEPMRAgd--pPETLPFPVITv--------------- 151 Desulfococcus m...
OQY11737      68 EDSp--PALILLTGCGGAFHQsgLGIGDIGIASTEIDIHMGieNDNDNFl----LKDPPFQLLEkdglsi--------kn 133 Desulfobacterac...
ETR74636      69 EKMp--VHLVINTGCAGAFSEkgFTIGDIGIATQETDIHSG--VEPIPPdr--lIKQLPFPVIQn--------------- 127 Candidatus Magn...
KPA11559      70 EKNs--VGLILNMGCAGAFELsgLSIGDIGIATSETYIHSGv-ESSSAMn---mITPLPFPLIQt--------------- 128 Candidatus Magn...
WP_012174701  63 EKTl--PALVLQTGCGGGFAQagINKGDVVVATEMIDVQSG--VEPATPpd--iVDALPFPVLKtpageitnrypadirl 136 Desulfococcus o...
OSZ82190      60 AAHr--YDIVVQAGIGGAYNRq-LQLGQVVLIATEQYGDMGa-QDHDSY-----IDINALGLLDg--------------- 115 Chitinophagacea...
SKA80262      59 ATLgdrPAGVINCGLAGAFDTtsHRLGSLCIAAEEINPEYGl-YTPDGLv----PDGLGFAQYEq--------------- 118 Desulfovibrio b...
Feature 1                                                            ##                  ## ##   
Q39Q81       125 ---gGRRFFNEFPLallpaera----------vqlgaalGVPVRRGRFVTVSTCSGTtarGNALARRFn-AICENMEGAV 190 Geobacter metal...
jgi:Dde_3188 145 -pvwNSIELNPAPAlavl-----------------qltpPPLCRTGGSLTVAAASGTaerACAMRQTHh-ALTENMEGFA 205 Desulfovibrio a...
SCY66303     126 ---nGKEYRHRFLLdrdlagdam-------aairnrglsGFHLHKGSFVSGSTITATqarAKSLFTLYc-PVMESMEGAA 194 Desulfoluna spo...
AQU99777     152 ---dGVPVKGRYPLsrgwaktavdallraadevsgsspaGIRVMRGPFLTVSTITATdrgAEARYRHHg-ACMEAMEGAG 227 Desulfococcus m...
OQY11737     134 kypiAHILRTRALDilsny----------------fkqeNVNVKEGPFITVSTITASndrAEKLYKRFn-PIMEAMEGTG 196 Desulfobacterac...
ETR74636     128 ---eTCQSFGAYPTsekysklayd------ilcqqylfnSVQVKQVPFITVSTITASedrRKNLYRYYq-AGMENMEGAG 197 Candidatus Magn...
KPA11559     129 ---nDYKFFAKYPTsenhthlayk------ilkqsffskDIHIKKIPFITVSTITAMdlsVKALYQKYq-AGMENMEGAG 198 Candidatus Magn...
WP_012174701 137 adtaCRAARNAPMAt------------------------GCGAAMGPIGSVVTITATdlrAQALFDRFg-LCMEAMEGAA 191 Desulfococcus o...
OSZ82190     116 ---nTHPYIDGKLPapet-----------------eagkALQLQVVSGITVNTVSGNeatIARMQTEYa-PDTESMEGAA 174 Chitinophagacea...
SKA80262     119 ---dEQRVFDRIQLepytaat------------amglslPQGWPLCPMLSVAGVSGTaerAQEMQTRYphAMLENMEGFA 183 Desulfovibrio b...
Feature 1                       #  ##            #             
Q39Q81       191 AAHLALRYGIDCLELRGISNMVEDRdlsGWNIPLAVERAQRFILKF 236 Geobacter metallireducens GS-15
jgi:Dde_3188 206 LALGCLRQGVPFLELRTVSNVVGSRaahDWAVDDAFASLGQAARAL 251 Desulfovibrio alaskensis G20
SCY66303     195 AAHIALHYGIPFLEIRGASNLVGARnrdAWNLPLAFENSCACLMAV 240 Desulfoluna spongiiphila
AQU99777     228 AAHVACRYGVDLLEVRAASNLVGRRrrdAWNLDLAFERATWAVLTI 273 Desulfococcus multivorans
OQY11737     197 GAHLAIHYGIPFLEIRAVSNMVGKRdisKWNLPLAFKNGSLAMSQI 242 Desulfobacteraceae bacterium 4572_19
ETR74636     198 IAHIAAHYCLPFMEIRSASNFVGDRnkaNWQLALAFERSTNAILLV 243 Candidatus Magnetoglobus multicellularis str. Ara...
KPA11559     199 IAHVAIQYGIPFLEIRAASNFVGERdkkKWQLNQAFERSALAVGIV 244 Candidatus Magnetomorum sp. HK-1
WP_012174701 192 AAHVCLHYGVPFLEIRGASNIAGRRdraDWDIPLAATNAAISVCAF 237 Desulfococcus oleovorans
OSZ82190     175 MHYVCLMEGVPFLQIRAISNYVEPRnreKWDIPLAVHNLNDVLAKL 220 Chitinophagaceae bacterium IBVUCB1
SKA80262     184 LALSCLHESIPFLELRSVSNKIGSRekaDWNIVAGFSALGRAMTML 229 Desulfovibrio bizertensis DSM 18034

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