Conserved Protein Domain Family
BRCT_TopBP1_rpt8

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cd17728: BRCT_TopBP1_rpt8 
eighth (C-terminal) BRCT domain of DNA topoisomerase 2-binding protein 1
TopBP1, also termed DNA topoisomerase II-beta-binding protein 1, or DNA topoisomerase II-binding protein 1, functions in DNA replication and damage response. It binds double-stranded DNA breaks and nicks as well as single-stranded DNA. TopBP1 contains six copies of BRCT domain. The family corresponds to the eighth BRCT domain. The Trp-X-X-X-Cys/Ser signature motif of the BRCT family is not conserved in this group.
Statistics
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PSSM-Id: 349360
Aligned: 33 rows
Threshold Bit Score: 58.8217
Created: 20-Jul-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q92547       1396 GWKVILHVdqs-------reAGFKRLLQSGGAKVLPGhsvpl-----------fkeaTHLFSDLnklkpddsgvniaeaa 1457 human
XP_002123612  131 GWVVGLCVak--------sfQVYKRLLEIGGGKAINLkqtk------------hkdfTHILVGKtidskve------sys 184  vase tunicate
OQV13163      837 GWKVVLAAdpk-------kvDGYIRLLEAGGATIITTsppwqr---------hkddaTHFLHEMhkvavtped--lfqfa 898  Hypsibius duj...
KII69315      668 GWKVWLVApeq-------klDTYKRILLSGSAIVITDrqvay----------ntrdiTHVFIDKdhvisete---fekmt 727  Thelohanellus...
XP_002405192 1260 EWRVILFAsga------akeAVYRRVLEAGGATILPSsppdf----------qtgdvTHALFDAgtarsvdl----kllt 1319 black-legged ...
ORC90240      692 SWSIILCCatd------artESFSRVLRIGGCNVVRPyspsqlldklvedpdvlqdtTAVLSDDsvwsgtq-----leti 760  Trypanosoma t...
XP_002430820 1149 NQKVVLHVshs-------kyDSFKRLIEAGCGIVVKGqppny----------sgvdaNLCLYEAhgstqpin---fsyla 1208 human body louse
XP_003294915 1105 GRKIFDLAriafssknihtfEAWKKILSCGNAELFEVgaiksld------elkdkriTHYIYFNtketdpiyn-lidknp 1177 Dictyostelium...
GAA28015     1361 NWRVIFGPgcd-------keTSFRRVIEAGAGQVLASgppyp----------passvTHSFYKSrsstsvn-----rnql 1418 Clonorchis si...
CRK87722     1209 GISFILVAsrd-------kiLQFTSVIKAGGGNVIDIdmkvpika----ailkrhnvDICLYDSvqnlnken---iellk 1274 Clunio marinus
Q92547       1458 aqnVYCLRTEYIADYLMQE 1476 human
XP_002123612  185 kmgVPCLKCEYLAQYLLHD 203  vase tunicate
OQV13163      899 gagCRSEKVEFISHYLMDE 917  Hypsibius dujardini
KII69315      728 eltSQVFTLEYIFQYLTKT 746  Thelohanellus kitauei
XP_002405192 1320 dagVLCLKAEYMATFLVDD 1338 black-legged tick
ORC90240      761 aalVPVLKMEYLAHCLCVN 779  Trypanosoma theileri
XP_002430820 1209 kkkIPCVSILYISDTLLRD 1227 human body louse
XP_003294915 1178 sagIQVLLTNTITKHLNNG 1196 Dictyostelium purpureum
GAA28015     1419 padYEWLRIDYLLAYLTAG 1437 Clonorchis sinensis
CRK87722     1275 kckVKLSNINVINQYLMSE 1293 Clunio marinus
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