Conserved Protein Domain Family
RUN_SNX29

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cd17689: RUN_SNX29 
RUN domain found in sorting nexin-29 (SNX29) and similar proteins
SNX29, also called RUN domain-containing protein 2A (RUNDC2A), belongs to the sorting nexin family. Sorting nexins are a large group of proteins that are localized in the cytoplasm and have the potential for membrane association either through their lipid-binding PX domain, a phospholipid-binding motif, or through protein-protein interactions with membrane-associated protein complexes. Some sorting nexin family members have been shown to facilitate protein sorting. This model contains the RUN domain of SNX29.
Statistics
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PSSM-Id: 439051
Aligned: 35 rows
Threshold Bit Score: 198.609
Created: 8-Mar-2016
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8TEQ0        16 RLLDAVKQCQIRFGGrk-eIASDSDSRVTCLCAQFEAVLQHGLKrsrglaltaaaik------------------qaagf 76  human
KJE94860      74 RTSDALKQVQVRFAGkt-eISTGQESQVSLLCAALEAIFAHGLRrssnkklvestlrl-----------------lplai 135 Capsaspora owcz...
XP_004990343  35 RASDAIKAVQREYAGkt-tIATDKDSQVTCLCAQLEAILCHGLKtsrkr------------------------------- 82  Salpingoeca ros...
XP_001750443  56 RVKDAIKAVQLHFTSqv-gLATSADARVATLIAQLESAFVHGLKsarrr------------------------------- 103 Monosiga brevic...
XP_012566573  94 HEIALNQECQVDFGGks-iLASEKDSSVSCLVAQFEQAFQHGLKknkmwemissyvep----------------vrqitd 156 Hydra vulgaris
KFD52994      24 KLLESTEQCKANFGSr---VVDEGDVKAARLISAIESALFHGLRrtyvdmplikevtgf--------------msklnld 86  pig whipworm
KRY00769      25 KLLETGKQCEIAFGKkdsnVATDKNSIVSYFLSALESVLFHGLRrrfsdvpvvkemtdwvs-----------klnldlgs 93  Trichinella pse...
ODM98474      18 RLLEGVKGCQSRFGPrs-eLATEDNESVAKLCAAYEDVFSHGFRktsqqsstsktaf-------------------wvpa 77  Orchesella cincta
OQR77955      14 ELLDALKECQARFGSgq-eLATEQDARVAALCASVERAFAHGIRtqpphgapqssitnm---------------vrglli 77  Tropilaelaps me...
XP_018014687  13 EFLGSVKACQAKYGSkq-eLATEADPRVCSVCSSVEQFLCHGIKlsnstgpsdssvsairqvteyvssglqlsfgsssds 91  Hyalella azteca
Q8TEQ0        77 asktetepVFWYYVKEVLnkHELQRFYSLrhiasDVGRGRAWLRCALNEHsLERYLHMLLADrcr--lstFYEDWSFVMD 154 human
KJE94860     136 vkpeanegGWWLYLRACLdpRELERCSKLpnittDIGRARAWLRIALNEHmLDKYFGIFARNqrl--tiqHYEDYAFLAD 213 Capsaspora owcz...
XP_004990343  83 ----nvefTYWPFVRAFLpqSEVKEIELLsnittNSGRGRAWLRSALNDQtLKPYLDKFAQQpdv--arnFYEGHAFVLD 156 Salpingoeca ros...
XP_001750443 104 ----qaevSFWPMVRELLesADVVHYTCLknittDSGRGRAWLRTALNEQlLQSFFERIEKHqsi--vrqYYDDYALLLD 177 Monosiga brevic...
XP_012566573 157 kmlleidlTFWSVVKEYLgtSELNYFNTLpdittDSGKARVWLRTAINETtLERQLLLILGNval--lkqFYEPWALFID 234 Hydra vulgaris
KFD52994      87 vgtvpcdtEFWLSIKSVLsgDEIRCLESLqsiscDVGRIRAWLRCALNENnFGRFISAILDNesl--lyrSHEDWAFMRD 164 pig whipworm
KRY00769      94 ygnapcdnELWNAMRQILdkSDVDRLEKLrcvsaGVGRLKAWLRCSLNEAtFEKYLNLFLSNsal--iekCYEEWAFLRD 171 Trichinella pse...
ODM98474      78 vlrssdptSFWPLIKSQLskHEAERFLLLhnvrtDLGRCRAWIRASLNEHsLERYILIILSLenl---hdFYDTWSFLRD 154 Orchesella cincta
OQR77955      78 qndvrgssDLFAFISSFLsrHELERFQLLknvttDAGRARAWIRCAINEHsLEKYCKKLFAVqerarlekFYESWAFLRD 157 Tropilaelaps me...
XP_018014687  92 sasllphaVAWTFISSQLtaHEASRFLRLrhvacATGRLRAWIRSALNEHsMERYLRILLSNtls--lekHYEPWAFLRD 169 Hyalella azteca
Q8TEQ0       155 eeRSSMLPTMAAGLnSILFAINID 178 human
KJE94860     214 eeRVGIVKNLLVGLnSVVFALQAD 237 Capsaspora owczarzaki ATCC 30864
XP_004990343 157 eeKLNMLAMLLQGL-ETHFMLELD 179 Salpingoeca rosetta
XP_001750443 178 heRAHVFAMLFQGLeSTHFALEVD 201 Monosiga brevicollis MX1
XP_012566573 235 geRSSIIPVMARGLaSIVFAIDVK 258 Hydra vulgaris
KFD52994     165 rnKLTSLADVAKELnGVHFALRID 188 pig whipworm
KRY00769     172 aeKVSSLRQLIRGIkCVRFSLDFD 195 Trichinella pseudospiralis
ODM98474     155 heLNSLLPQTAAGLgSVFFALTVD 178 Orchesella cincta
OQR77955     158 eeLCAVLETMSQGMkSILFALNVD 181 Tropilaelaps mercedesae
XP_018014687 170 ssKVAELPQLAQGLgKIFFALIID 193 Hyalella azteca
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