Conserved Protein Domain Family
RUN_RUNDC3

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cd17684: RUN_RUNDC3 
RUN domain found in RUN domain-containing protein 3 (RUNDC3) and similar proteins
RUNDC3 contains two isoforms, RUNDC3A and RUNDC3B. RUNDC3A, also called Rap2-interacting protein 8 (RPIP8), may act as an effector of Rap2A GTPase in neuronal cells. RUNDC3B, also called Rap2-binding protein 9, or Rap2-interacting protein 9 (RPIP-9), contains a RUN domain in its N-terminal region that mediates interaction with Rap2, an important component of the Mitogen-Activated Protein Kinase (MAPK) cascade, which regulates cellular proliferation and differentiation. It also contains characteristic binding sites for MAPK intermediates. Both RUNDC3A and RUNDC3B contain a RUN domain.
Statistics
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PSSM-Id: 439046
Aligned: 8 rows
Threshold Bit Score: 255.015
Created: 8-Mar-2016
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q59EK9        30 NLITVCRFSVKTLLEKYTAepidd-sseeFVNFAAILEQILSHRFKacapagpvs------------wfssdgqrGFWDY 96  human
XP_014787793  23 NLVNICRLAVKSLIDMASLdiidd-dceeLINLLAILEQILMHRLRphktwy-----------------gsegtrPFWDY 84  Octopus bimacul...
XP_009055149  25 NLVSVCGLSVKSLIDKACFstied-gceqLINFTANLEQILLHQIRpqknwy-----------------ggaenlHFWTY 86  owl limpet
XP_014666730  18 NLVHVCRLSIKSLIDKSCFevidd-kseeLLNFAVILEHILSHRLKsgvtwy-----------------gseerkTFWQF 79  Priapulus caudatus
ELU06500       9 VQFFSHRCAVKSLIDASCDrpine-eseeVCNFLAVLEHVFSHRLKatawms------------------sseprRFWEF 69  Capitella teleta
XP_013066328   2 SPDVMYRISVKSLLDYACLythvdddseeFINFCAVFEQLVSHRLKpyqkkvwl--------------pgngtprHFWNL 67  Biomphalaria gl...
XP_002109597  21 NVVELCKLGVKSILSKAALgsidd-ssteLQNFCVAVEQMLTLGLKgvkpwa-----------------mhdtsiTFWNY 82  Trichoplax adha...
Q96NL0        35 NLITVCRFSVKTLIDRSCFetidd-sspeFNNFAAILEQILSHRLKeisqscrwlahlqiplqgqvtwfgyesprSFWDY 113 human
Q59EK9        97 IRLAcs----kvPNNCVSSIENMenistaRAKGRAWIRVALMEKrMSEYITTALRDtrttrrFYDSGAIMLrdEATILTG 172 human
XP_014787793  85 IRVAcq----gvAHNCIESINTIenirspHAKGQAWLRVVLMEKrLSEYLSEALKQtritknFYQEGAVMLsdDAKMLCD 160 Octopus bimacul...
XP_009055149  87 IKQAck----niPQSCISNIDSIeniksmSAKGRAFIRCALMEKrLSEYISTAVKQtkltkkYYLDGAILLseEATMICG 162 owl limpet
XP_014666730  80 IKATcr----klPGSSIAKIESLtglrspLAKGRAWIRLALMEKkLAAYLSEALKQekllrnYYEDQAVMLteDASVITG 155 Priapulus caudatus
ELU06500      70 VKSAck----svPHNSICNIEQMdcpktaQGKGRAWLQLSLMEKrLAEYMNEMLMQtrmlrqFYQPGALMLseDAGLISG 145 Capitella teleta
XP_013066328  68 LQENhnsshgaiFQTCIPNIEAIetlkspKAKLRAFIRVALMEKrLSDYMFWLLNNsrlirdNYFDGAIMTseEASVLCS 147 Biomphalaria gl...
XP_002109597  83 IRDAck----giPQNCIASISQMsnpktpKGKVRAWIRMALMEKrLSEYLATAVQNnyltrlHYHDDAIILteDGTVLIG 158 Trichoplax adha...
Q96NL0       114 IRVAcr----kvSQNCICSIENMenvsssRAKGRAWIRVALMEKhLSEYISTALRDfkttrrFYEDGAIVLgeEANMLAG 189 human
Q59EK9       173 MLIGLSAIDFSF 184 human
XP_014787793 161 TLLGMNAIDFSF 172 Octopus bimaculoides
XP_009055149 163 VLLGLNSIDFSF 174 owl limpet
XP_014666730 156 MLVSLNAIDFSF 167 Priapulus caudatus
ELU06500     146 LLIGLNVLDFSF 157 Capitella teleta
XP_013066328 148 DLIGLNAIDFNF 159 Biomphalaria glabrata
XP_002109597 159 YFNSLKTVDFTL 170 Trichoplax adhaerens
Q96NL0       190 MLLGLNAIDFSF 201 human
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