Conserved Protein Domain Family
MFS_CitA

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cd17368: MFS_CitA 
Citrate-proton symporter of the Major Facilitator Superfamily of transporters
Citrate-proton symporter, also called citrate carrier protein or citrate transporter or citrate utilization protein A (CitA), is a proton symporter that functions in the uptake of citrate across the boundary membrane. It allows the utilization of citrate as a sole source of carbon and energy. In Klebsiella pneumoniae, the gene encoding this protein is called citH, instead of citA, which is the case for Escherichia coli and other organisms. CitA belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
Statistics
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PSSM-Id: 340926
Aligned: 8 rows
Threshold Bit Score: 461.073
Created: 1-Nov-2016
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative chemical substrate binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of MFS transporters with bound substrates, substrate analogs, and/or inhibitors
  • Comment:since MFS proteins facilitate the transport of many different substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides, the residues involved in substrate binding may not be strictly conserved among superfamily members
  • Comment:the substrate binding site or translocation pore has access to both sides of the membrane in an alternating fashion through a conformational change of the MFS transporter

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               ##  ##  #                                          #                  
P0A2G3     17 ILRVTSGNFLEQFDFFLFGFYATYIArtffp-----aesefASLMLTFAVFGSGFLMRPVGAIVLGAYIDRiGRRKGLMV 91  Salmonella typhimu...
NP_253033  14 VAAAVIGNALEWYDFIVYGFLSSLIArlffp-----sgdeyTSLLMALATFGVGFFMRPVGGVLLGLYADRrGRKAAMQL 88  Pseudomonas aerugi...
P07661     14 ILRVTSGNFLEQFDFFLFGFYATYIAktffp-----aesefAALMLTFAVFGSGFLMRPIGAVVLGAYIDRiGRRKGLMI 88  Escherichia coli
NP_249394  19 VFAVVLGNAVEFFDFGVYATFAVMIGrtffp-----sdsafVSLLLSVTAFGVGFVIRPLGAVLIGAYADRaGRKPAMLL 93  Pseudomonas
NP_774545  20 ILRATSGNFLEQFDFFLFGFYAAAIGkaffp-----stnetASLLNTFGVFWLGALMRPVGAIVLGAYIDRiGRRQGLIV 94  Bradyrhizobium
NP_766879  27 IAAAIAGNALEWYDFTVFALMTPVIKnlffpvdpkisgseiNALLLTTALFGTGFFMRPIGGLVLGYFGDRkGRKAAMTL 106 Bradyrhizobium dia...
NP_312920  21 IFASAFGNALEFFDFGVYNFFVVYIStlffpp----sadknVALLLAFATFGVSFFMRPLGGIIVGAWADRfGRKPAMVF 96  Escherichia coli
NP_768504  41 VLGATIGNMLEFYDFGTYSFFAIQIGqaffp-----atdqfASLMLSLGTFGAGFVTRPIGSIVLGSYSDRvGRRPAMTA 115 Bradyrhizobium
Feature 1                                            ## ###  #                   #  ##  #     
P0A2G3     92 TLAIMGCGTLLIAlvpgyqtiglaapalVLLGRLLQGFSAGVELGGVSVYLSEiatpgnKGFYTSWQSASQQVAIVVAAL 171 Salmonella typhimu...
NP_253033  89 IILLMTLSIAMIAfaptyaaigvgapllIVIARMLQGFATGGEYASATAFLVEsapphrRGLYGSWQLFGQCLAVFAGAG 168 Pseudomonas aerugi...
P07661     89 TLAIMGCGTLLIAlvpgyqtigllapvlVLVGRLLQGFSAGVELGGVSVYLSEiatpgnKGFYTSWQSASQQVAIVVAAL 168 Escherichia coli
NP_249394  94 TLFLMALGTGGIAvlpgydsigpaapllLVLTRLLQGLAWGGEAGPATTYILEaapphkRGTYACWQVVAQGIAAVAAGL 173 Pseudomonas
NP_774545  95 TLGIMAIGTVVIAfcpsyatigiaapviVLIGRLLQGFSAGVELGGVSVYLAEistpgnRGFYTSFQSSSQQVAIFVASI 174 Bradyrhizobium
NP_766879 107 GMGIMAVSVALLAltptyatagiaapliVLLARLLQGFSVGGEFGTSTAYLIEaappgrTGFYGSWQIAGQLMANVLGAV 186 Bradyrhizobium dia...
NP_312920  97 TIALMSLGTLMIGiaptyetagywgtatLVLARLIQGVAAGGEVGASMSLLVEsapanrRGFYSSWSLATQGLATTFGGV 176 Escherichia coli
NP_768504 116 SFAMMSVAVLLLAitpsyetigfaapllAIFARLLQGFALGGEVGPTTAYLMEaapakaRGLAVSFQPASQQVAATAGAL 195 Bradyrhizobium
Feature 1                                                                                     
P0A2G3    172 IGYSLnitlghd-----aisewgWRIPFFIGCMIIPLIFVLRrslqeteaflqrkhr-pdtreifatiaknwRIITAGTL 245 Salmonella typhimu...
NP_253033 169 MGALVthcldae-----aleswgWRVPFLFGLLIGPVGLWIRrymgeteafleairepgerqgllgvlreyrRSVLVSMG 243 Pseudomonas aerugi...
P07661    169 IGYGLnvtlghd-----eisewgWRIPFFIGCMIIPLIFVLRrslqeteaflqrkhr-pdtreifttiaknwRIITAGTL 242 Escherichia coli
NP_249394 174 MGYLLtlwlder-----qlqewgWRIPFAAGLLVLPIGLYIRlnlaetfsgrgrqa--strnllgelfgnhrRALLLGLL 246 Pseudomonas
NP_774545 175 LGYLLsevmpad-----tvaawgWRIPFFVGCLIIPLIFFLRrtleetpaflamkkh-ptasevfasalanwRIVILGMM 248 Bradyrhizobium
NP_766879 187 LGAALtlaftqe-----qlaagaWRIPFFVGLVIVPILLYMRasviepeasrrsmat-lhkdnfiaalknpgRNFLIGMG 260 Bradyrhizobium dia...
NP_312920 177 VALGLsawlpfatgsetvmaewgWRVPFFIGVLLAPVGCWLRlslendvpepahnkkaaasesafsllmqhkATIANGIL 256 Escherichia coli
NP_768504 196 VGEILsltmtse-----alnaygWRIALLLGAVTLPFGLWLRsvlpetflrpeapv---lvtrpvrrspaarRIMSLGFV 267 Bradyrhizobium
Feature 1      #  ##  ###  #                           #   #                                  
P0A2G3    246 LVAMTTTTFYFITVYTptygrtvlnlsaRDSLIVTMLVGVSNFIWLPIGGAISDRiGRRAVLMGITLLALITTWPVMqwl 325 Salmonella typhimu...
NP_253033 244 LTVVGTVSFYVVLVNMptfahkqlglplDEVFMVQMAAVALMTLVIPLAGGLSDRvGRRPVLLVATLAFMLMVYPLFawv 323 Pseudomonas aerugi...
P07661    243 LVAMTTTTFYFITVYTptygrtvlnlsaRDSLVVTMLVGISNFIWLPIGGAISDRiGRRPVLMGITLLALVTTLPVMnwl 322 Escherichia coli
NP_249394 247 ILSGSTITQYFLNYMTtfalte-lhlpaGIAMLSTLVAGAALALSALLGGVLCDRyGRRAVLILPRLALLAVLFPALqam 325 Pseudomonas
NP_774545 249 IAILTTTTFYFVTVYTptfgktvlklstQDALLVTLLVAVTNFFWNPVGGALSDRiGRKPVLITIACLSLVTAYPALhwl 328 Bradyrhizobium
NP_766879 261 MVVASAVSFYVTFGYTvtyakevlklplMQSFLVQMIAAIVMVIVVPIAGAVSDRyPRRPLLLVSLIGYFVSLYPLYawv 340 Bradyrhizobium dia...
NP_312920 257 LAIGSTVATYISLFYYgtwaakylgmnqNYSHAAMLLAGVITFVGALLVGMLCDSvGRKKLILISRVMVLICSWPSFwll 336 Escherichia coli
NP_768504 268 ILASCTITTYVTGYMTtyalnt-lhvsaPLAFGATLISNMAGIAAALLGGLLADRaGRRRVMIWPQAAALLMIYPVFlwi 346 Bradyrhizobium
Feature 1                       ##   #   #               #  ##  ##  #                         
P0A2G3    326 taapdfTRMTLVLLWFSFFFGMYNGAMVAALTEVMpvyvRTVGFSLAFSLATAIFGGLTPAISTAlvkltgdKSSPGWWL 405 Salmonella typhimu...
NP_253033 324 aaapslGRLLLMQLLLCTAIGGFFGPAPTAVAEQFpvrvRSTGLAVAYNLAVMLFGGFAPFIVTWltevggsPVAPAFYV 403 Pseudomonas aerugi...
P07661    323 taapdfTRMTLVLLWFSFFFGMYNGAMVAALTEVMpvyvRTVGFSLAFSLATAIFGGLTPAISTAlvqltgdKSSPGWWL 402 Escherichia coli
NP_249394 326 trhpepAVFLAVLALLSALHGMSGAALIVLLVESFpralRSTGFSLVYATGVAAFGGTAQIVVTWligvtgnPLSPLGYL 405 Pseudomonas
NP_774545 329 vaaptfGKLLAVEMMFSFYFGVYSGTMLGALVEIVpahvRTTCFSLAFALAAALFGTFTPFASTWliertgdKASPGFWL 408 Bradyrhizobium
NP_766879 341 isepsiARLLVAQIVIGFFSAFFLGVYCTTLVELFpirvRSTALAIVNNVAVLVFGGFAQFFVTWlialtgsPLAPIFYV 420 Bradyrhizobium dia...
NP_312920 337 vnypspGMLLTVVFVMVSFTTLGGVPVMLLISELLpkriRALGFALVYSIGVAIFGGFAQYFATQsivlldsLTAPAWYL 416 Escherichia coli
NP_768504 347 aesrsaFALLGGLGTLTLIGTVPYSAFYVSMAESLprniRGGAFGTTYAFAIGIFGGTAQLVVTWliyltgsALAPAWYM 426 Bradyrhizobium
Feature 1                       
P0A2G3    406 MCAALCGLAATAMLFVRL 423 Salmonella typhimurium
NP_253033 404 LGAAFLGLLATLYLREGA 421 Pseudomonas aeruginosa
P07661    403 MCAALCGLAATTMLFARL 420 Escherichia coli
NP_249394 406 LLANLVCLVGAWLARETW 423 Pseudomonas
NP_774545 409 MFAALLGIIAASTVYRGG 426 Bradyrhizobium
NP_766879 421 MIGVGLGLIAVIAMRPED 438 Bradyrhizobium diazoefficiens
NP_312920 417 GGGTLLSMLALLYVKEPA 434 Escherichia coli
NP_768504 427 LFASAAGLFAMVMMPETA 444 Bradyrhizobium

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