4TKN


Conserved Protein Domain Family
FERM_F1_SNX17_like

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cd17109: FERM_F1_SNX17_like 
FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in PX-FERM family sorting nexin proteins
This family includes three endosome-associated PX (Phox homology) and FERM (Band 4.1, ezrin, radixin, moesin) domain-containing proteins called sorting nexin (SNX) 17, SNX27, and SNX31, which are modular peripheral membrane proteins acting as central scaffolds mediating protein-lipid interactions, cargo binding, and regulatory protein recruitment. They are key regulators of endosomal recycling and bind conserved NPX(Y/F) peptide sorting motifs in transmembrane cargos via an atypical FERM domain. The FERM domain is made up of three sub-domains, F1, F2, and F3. This family corresponds to the F1 sub-domain, which is also called the N-terminal ubiquitin-like structural domain of the FERM domain (FERM_N).
Statistics
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PSSM-Id: 340629
Aligned: 3 rows
Threshold Bit Score: 146.973
Created: 5-Jan-2017
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
key conserved
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1: key conserved lysines, 2 residue positions
Conserved feature residue pattern:[KR] [KR]Click to see conserved feature residue pattern help
Evidence:
  • Comment:2(K33/r, K48/R, Ub numbering) of the 7 lysines involved in chain linkage in ubiquitin (K6, K11, K27, K29, K33, K48, or K63, Ub numbering) are conserved in this family; may have roles other than chain linkage

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                       #                           #                 
4TKN_A     10 EEVSLEVLLsNGQKVLVNVLTsDQTEDVLEAVAAKLDLpddLIGYFSLFLVREKEdgafsFVRKLQEfELPYVSVTSLrs 89  human
Q8N9S9    115 KKAYLDIFLpNEQSIRIEIITsDTAERVLEVVSHKIGLcreLLGYFGLFLIRFGKegklsVVKKLADfELPYVSLGSSev 194 human
Q96L92    273 SDVELRVALpDGTTVTVRVKKnSTTDQVYQAIAAKVGMdstTVNYFALFEVISHS-----FVRKLAPnEFPHKLYIQNyt 347 human
Feature 1                     
4TKN_A     90 ---qEYKIVLRKSYWD 102 human
Q8N9S9    195 ---eNCKVGLRKWYMA 207 human
Q96L92    348 savpGTCLTIRKWLFT 363 human

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