1WIA


Conserved Protein Domain Family
Ubl_TMUB1_like

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cd17057: Ubl_TMUB1_like 
ubiquitin-like (Ubl) domain found in transmembrane and ubiquitin-like domain-containing proteins TMUB1, TMUB2, and similar proteins
TMUB1, also termed dendritic cell-derived ubiquitin-like protein (DULP), or hepatocyte odd protein shuttling protein, or ubiquitin-like protein SB144, or HOPS, is highly expressed in the nervous system. It is involved in the termination of liver regeneration and plays a negative role in interleukin-6-induced hepatocyte proliferation. The overexpression of Tmub1 has been shown to play a role in the inhibition of cell proliferation. TMUB1 has been implicated in the regulation of locomotor activity and wakefulness in mice, perhaps acting through its interaction with CAMLG. It also facilitates the recycling of AMPA receptors into synaptic membrane in cultured primary neurons. TMUB1 contains transmembrane domains and a ubiquitin-like (Ubl) domain with a beta-grasp Ubl fold. TMUB2 is an uncharacterized transmembrane domain and Ubl domain-containing protein that shows high sequence similarity to TMUB1.
Statistics
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PSSM-Id: 340577
Aligned: 23 rows
Threshold Bit Score: 86.5085
Created: 10-Jul-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
key conservedkey conserved
Conserved site include 1 residue -Click on image for an interactive view with Cn3D
Feature 1: key conserved lysine K27, 1 residue position
Conserved feature residue pattern:[KR]Click to see conserved feature residue pattern help
Evidence:
  • Comment:K27 (Ub numbering) is a lysine conserved in the Ubl_ubiquitin_like family; it is one of 7 lysines involved in chain linkage in ubiquitin (K6, K11, K27, K29, K33, K48, or K63, Ub numbering); may have other functions, for example for NEDD8 it is involved in the mechanism of protein neddylation

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                    #                                                   
1WIA_A         7 GINVRLKFl-nDTEELAVARPeDTVGTLKSKYFpg----qeSQMKLIYQGRLLQdp---------arTLSSLNITNNCVI 72  house mouse
CDS24263     124 NIVLRLQYl-nDRVRYVHAPPeMPVLLFKRKFFadelerqhKSVRLIFQGRELKppavasrdspsrrRLCDYGVSDNATI 202 Echinococcus gr...
XP_013390196 258 LIRLRLRFl-sEVERHVQGRMqETVAQLRSREFaael-eenKIIRFIFNGRELKpd---------tqTLQTFNIGDSSII 326 Lingula anatina
KXJ16971     166 QFSIRVKHh--EIERSFXVEPsMTVGELKRLAFpeev-aqgRRVRFIYSGRLLNdd---------saHISFYGISNYSVV 233 Exaiptasia pallida
XP_002110139 163 TWTLTIVMl-dQSRKVVSANPmATVGELKEIAFpqdl-aagASVRLIYRGYELRds---------irTLAAYHITNHSNI 231 Trichoplax adha...
XP_003388166  79 TITLRLVTq--ERTRMVYVPEnSTLEDLKRRYFndes-lagDTIYFIYQGRMLQdt---------sgTLIELGISDQTSV 146 Amphimedon quee...
XP_002127576 134 QFSIRLKFl-dETVQIVQARTtETVGEFRRRVFpva---vaSRYRIIFQGQVLRddnqtl--aqcrlGPNLNSPQDFPVV 207 vase tunicate
XP_012556482 104 DDVISIKVinnEVFHIHTVSKfMKLSDLKRKCFpvey-dsaKNIRFIYRGCILSvd---------ssTLNDLNIIDGSVI 173 Hydra vulgaris
KJE92356      14 IILLRLKVg--EQDRSALATRdMTLAELCATHFrdal-aqgNGVKFIHSGRLLQpd---------taTLEALGLQPGAVI 81  Capsaspora owcz...
EJY87023      28 IITIKIKKsdnQIVKLSINLKvDFVIDIKDRVFqker-degKNIRLIYQGKILQdq----------dSVSQYNIKDGAFI 96  Oxytricha trifa...
Feature 1             
1WIA_A        73 HCHRS 77  house mouse
CDS24263     203 HCLIS 207 Echinococcus granulosus
XP_013390196 327 HCLIA 331 Lingula anatina
KXJ16971     234 HAQIS 238 Exaiptasia pallida
XP_002110139 232 HAVRG 236 Trichoplax adhaerens
XP_003388166 147 HVHIR 151 Amphimedon queenslandica
XP_002127576 208 HCFLS 212 vase tunicate
XP_012556482 174 HCVIS 178 Hydra vulgaris
KJE92356      82 HCQVY 86  Capsaspora owczarzaki ATCC 30864
EJY87023      97 HAFIT 101 Oxytricha trifallax

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