1X5B,2L0T


Conserved Protein Domain Family
VHS_STAM2

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cd16999: VHS_STAM2 
Click on image for an interactive view with Cn3D
VHS (Vps27/Hrs/STAM) domain of Signal Transducing Adapter Molecule 2
Signal Transducing Adapter Molecule 2 (STAM2) is also called EAST (EGFR-Associated protein with SH3 and TAM domain) and Hbp (Hrs-binding protein). It is highly expressed in neurons, where it is localized in the nucleus. STAM (Signal Transducing Adaptor Molecule) subfamily members have at their N-termini a VHS domain, which is involved in cytokine-mediated intracellular signal transduction and has a superhelical structure similar to the structure of ARM (Armadillo) repeats, followed by a Ubiquitin-Interacting Motif (UIM) and a SH3 (Src Homology 3) domain, which is a well-established protein-protein interaction domain, and a GAT (GGA and TOM) domain. At the C-termini of most vertebrate STAMS, an Immunoreceptor Tyrosine-based Activation Motif (ITAM) is present, which mediates the binding of HRS (hepatocyte growth factor-regulated tyrosine kinase substrate) in endocytic and exocytic machineries. STAM is a component of the ESCRT (Endosomal Sorting Complex Required for Transport)-0 machinery and together with Hrs, functions to bind and sequester cargoes for downstream sorting into intralumenal vesicles.
Statistics
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PSSM-Id: 340796
Aligned: 7 rows
Threshold Bit Score: 299.194
Created: 26-May-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
ubiquitin
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:ubiquitin binding site [polypeptide binding site]
Evidence:
  • Structure:2L0T_B: Human STAM2 VHS domain binds in complex with ubiquitin; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #####  ##  #                                    #  ##             
1X5B_A        16 FEQDVEKATNEyNTTEDWSLIMDICDKVGsTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCsRD 95  human
2L0T_B        16 FEQDVEKATNEyNTTEDWSLIMDICDKVGsTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCsRD 95  human
XP_006002143   9 FDQDVEKATNEyNTSEDWGLIMDICDRVGtTPNGPKDCLKAIMKRVNHKVPHVALQALTLLGACVSNCGKIFHLEICsRD 88  coelacanth
NP_001080429   9 FDQDVEKATNEyNTSEDWRLIMDICDKIVnTPNGAKDGLRSIMKRVNHKVPHVALQALTLLGACVSNCGKAFHLEICsRE 88  African clawed ...
XP_007907456   9 FDQDVEKVTNEhNTSEDWTLIMDICDRVGtTPTGPKDCLKAIMKRVTHKNPHVAMKALTLLGACVSNCGKIFHLEICsRD 88  elephant shark
O93436         9 FEQDVEKATNEhNNSEDWGLIMDICDKVGsTPNGAKDCLKAIMRRVNHKVPHVALQALTLLGACVSNCGRIFHLEVCsRD 88  chicken
O75886         9 FEQDVEKATNEyNTTEDWSLIMDICDKVGsTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCsRD 88  human
Feature 1                                                                     
1X5B_A        96 FATEVRAVIk--nKAHPKVCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGiTFPPAG 154 human
2L0T_B        96 FATEVRAVIk--nKAHPKVCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGiTFPPAG 154 human
XP_006002143  89 FANEIHSILs---KAHPKVCEKLKALMVEWAEEFQKDPQFSLISATIKSLKEEGvVFPTSG 146 coelacanth
NP_001080429  89 FASEVRSVIt---KAHPKVCDKLKALMVEWEQELQKDPQFSLISATIKSLKEEGiSFPSSA 146 African clawed frog
XP_007907456  89 FTTEASNLLsvynKVHPKVCEKLKALMVEWSEEFQKDAQLSLITATIKALKEDGvSFPSAS 149 elephant shark
O93436        89 FATEARGIIn---KAHGKVSEKLKTLMVEWSEEFQKDPQCSLISATIKSLKEEGvTFPAAG 146 chicken
O75886        89 FATEVRAVIk--nKAHPKVCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGiTFPPAG 147 human

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