3FK3,3RLS,3RLS


Conserved Protein Domain Family
YEATS_Yaf9_like

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cd16908: YEATS_Yaf9_like 
Click on image for an interactive view with Cn3D
YEATS domain found in Yaf9 and similar proteins
Yaf9 is a YEATS domain family protein essential in the function the NuA4 histone acetyltransferase complex and the SWR1-C ATP-dependent chromatin remodeling complex. Yaf9 shares structural similarity with histone chaperone Asf1, both exhibit histone H3 and H4 binding in vitro, and evidence supports both play a role in the same histone acetylation mechanism. DNA regulation by chromatin thru histone post-translational modification and other mechanism involves complexes with write, eraser and reader functions. YEATS domains act as readers of the chromatin state, and stimulate transcriptional activity, thru preferential interactions with crotonylated lysines on histones. The YEATS family is named for several family members: `YNK7', `ENL', `AF-9', and `TFIIF small subunit', and also contains the GAS41 protein.
Statistics
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PSSM-Id: 341127
Aligned: 20 rows
Threshold Bit Score: 197.886
Created: 20-Sep-2016
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1: putative peptide binding site [polypeptide binding site], 9 residue positions
Conserved feature residue pattern:[HRK] H [TS] [FY] G [YW] [AG] [EG] FClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                    #                                         # ##   
3FK3_A      8 SVSRPIIYGNTAKKXgsvkp---pnapaEHTHLWTIFVRGpqn----------------edISYFIKKVVFKLHDTYPNP 68  baker's yeast
KXS10120   14 QVVKPIIYGSYAQPLiqk-------spqGHTHEWIVFVRGadg----------------enISHYVKKVVFKLHESFEVP 70  Gonapodya prolifer...
KJE93869   63 SLSCPIVYGNLAEVPd-----------eSHTHRWTVYVRGadg----------------ddISYVVKKVVFKLHDSYAES 115 Capsaspora owczarz...
KNE56062   10 QAALPIVYGNETSKLpdeap----elqfGHTHRWTVYVRGpng----------------adISHYVRKVVFRLHESFTNA 69  Allomyces macrogyn...
KCV70888   10 ILERGIVYGNSATLLarp-------tdnGHTHKWTVYVRGlyg----------------edISYFVRKISFKLHESFSPQ 66  Fonticula alba
KND04454   13 SHSRPIIYGSYAALLktgek----radpSHTHKWTVYVKGiqn----------------edLAVFIKKVSFKLHESFENP 72  Spizellomyces punc...
EOQ99506   11 QISRPVVIGNTARAItpeerekdatippTHTHRWTISVRSpspqraessydegcegihdegLSTWLRRVQIRLHDTYKDN 90  Wallemia ichthyoph...
EGF83227   11 TVSVPFLYGSTATAVtkkda----lvdpTHTHKWAVYVRGind----------------edLSYCIKRVLIKLHESFESP 70  Batrachochytrium d...
Q59LC9     13 SISVPILYGNHAIKLtpekrk--pttppEHTHEWTVFFKPvlg---------------didLTPLIKKVTFKLHETYENP 75  Candida albicans S...
OLY83490   12 VVSRPFIYGNVAVELnpp--------kqDHTHEWTVFVKScdg----------------sdLSHIIPKVEIKLHETFVSS 67  Smittium mucronatum
Feature 1                   #####                                                             
3FK3_A     69 VRSIEaPPFELTETGWGEFDINIKVYFVee----aNEKVLNFYHRLRLHPyanpvpnsdngn------------------ 126 baker's yeast
KXS10120   71 TRAIEsDPFEVRESGWGEFEIAIKIHFAd-----pAERSVTLYHGLQLYSkddtq------------------------- 120 Gonapodya prolifer...
KJE93869  116 LRTVEqPPYEVSETGWGEFEVQIKVFFRd-----aVEKPVTIFHHLALYPhaatl------------------------- 165 Capsaspora owczarz...
KNE56062   70 VRTVEaPPFEVTETGWGEFEIVIAVHLHd-----fPERPIKLTHMLRLFPpedqtvi----------------------- 121 Allomyces macrogyn...
KCV70888   67 TRVVDtHPFELTETGWGEFEIQIRLFFHd-----pHEKPVVLLHPLRLYPvegitt------------------------ 117 Fonticula alba
KND04454   73 LRVIEaPPFEVHETGWGEFDIAIKIYIHee---leSVKHIQLHHTLQLYPkedaa------------------------- 124 Spizellomyces punc...
EOQ99506   91 NRTLDkPPFVVSETGWGEFEVVIRLHFPse----aGERPMVLHHMLKLHPwnvtssip---------------------- 144 Wallemia ichthyoph...
EGF83227   71 NRVFEaPPYEVNETGWGEFEIMIKITLVd-----pLEKPITVYHQLQLYPkeeia------------------------- 120 Batrachochytrium d...
Q59LC9     76 VRTLEsPPYQVTETGWGEFEIIIKLHFQpgvelgiNEKNFQIFHALKLHPynpqapqaqqpqvqqsqaqppqqqfggegg 155 Candida albicans S...
OLY83490   68 NRVLTsLPYEVTETGWGEFEVIIKLFFPpc----sGENPISLYHMLKLYPpegqas------------------------ 119 Smittium mucronatum
Feature 1                                         
3FK3_A    127 eqnttdhnskdaEVSSVYFDEIVFNEPNEEFFKILX 162 baker's yeast
KXS10120  121 -------lvgrmPIRAEKYDEIIFNEPTEGMLRALE 149 Gonapodya prolifera JEL478
KJE93869  166 -------qpskkLLVFEQYDEIVFNDPSDKLYQMLM 194 Capsaspora owczarzaki ATCC 30864
KNE56062  122 -----ddpsrpdLLVMERYDEIVLNEPTEAFYDHFL 152 Allomyces macrogynus ATCC 38327
KCV70888  118 ------erdagkLVVAERYDEVIFNEPTHVMANQLE 147 Fonticula alba
KND04454  125 -------tasnkPVVSEHYEEIVFNEPTEETYNKLS 153 Spizellomyces punctatus DAOM BR117
EOQ99506  145 -----rddglppTVHSWQYDEIVFSDPHESFFHLLT 175 Wallemia ichthyophaga EXF-994
EGF83227  121 -------lqskkSVIVNHYDELIFNEPSEEYAESLK 149 Batrachochytrium dendrobatidis JAM81
Q59LC9    156 svgtvirerengEVHSVLYDELVFNEPTEKTFEILT 191 Candida albicans SC5314
OLY83490  120 ------nwpkhkQVNNVYFDELIFSEPTEEFFEILM 149 Smittium mucronatum

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