Conserved Protein Domain Family
RING-H2_RNF128-like

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cd16802: RING-H2_RNF128-like 
RING finger, H2 subclass, found in RING finger protein 128 (RNF128) and similar proteins
This subfamily includes RING finger proteins RNF128, RNF133, RNF148, and similar proteins, which belong to a larger PA-TM-RING ubiquitin ligase family that has been characterized by containing an N-terminal signal peptide, a protease-associated (PA) domain, a transmembrane (TM) domain and a C-terminal C3H2C3-type RING-H2 finger followed by a putative PEST sequence. RNF128, also known as gene related to anergy in lymphocytes protein (GRAIL), is a type 1 transmembrane E3 ubiquitin-protein ligase that is a critical regulator of adaptive immunity and development. It inhibits cytokine gene transcription, is expressed in anergic CD4+ T cells, and has been implicated in primary T cell activation, survival, and differentiation, as well as in T cell anergy and oral tolerance. It induces T cell anergy through the ubiquitination activity of its cytosolic RING finger. It regulates expression of the costimulatory molecule CD40L on CD4 T cells, and ubiquitinates the costimulatory molecule CD40 ligand (CD40L) during the induction of T cell anergy. Moreover, RNF128 interacts with the luminal/extracellular portion of both CD151 and the related tetraspanin CD81 via its PA domain, which promoted ubiquitination of cytosolic lysine residues. It also down-modulates the expression of CD83 (previously described as a cell surface marker for mature dendritic cells) on CD4 T cells. Furthermore, Rho guanine dissociation inhibitor (RhoGDI) has been identified as a potential substrate of RNF128, suggesting a role for Rho effector molecules in T cell anergy. In addition, RNF128 plays a role in environmental stress responses. It promotes environmental salinity tolerance in euryhaline tilapia. RNF133 is a testis-specific endoplasmic reticulum-associated E3 ubiquitin ligase that is mainly present in the cytoplasm of elongated spermatids. It may play a role in sperm maturation through an ER-associated degradation (ERAD) pathway. RNF148 is a testis-specific E3 ubiquitin ligase that is abundantly expressed in testes and slightly expressed in pancreas. Its expression is regulated by histone deacetylases.
Statistics
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PSSM-Id: 438454
Aligned: 10 rows
Threshold Bit Score: 97.1157
Created: 19-Mar-2015
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H H C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-H2 fingers with bound zinc
  • Comment:C3H2C3-type RING-H2 finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-H-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #              # #  #  #          #  #      
Q8TEB7       275 DSCAVCIELYKPnDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILK 323 human
XP_007891205 360 DTCAVCIEPYKPgDVVRILTCSHIFHKSCIDPWILEHRTCPMCKCDILK 408 elephant shark
XP_005991915 259 DSCAVCIEVYKPnDVVRILTCNHLFHKSCIDPWLLEHRTCPMCKCDILK 307 coelacanth
NP_997780    254 DACAVCIDSYKAgDVLSILTCNHFFHKSCIEPWLLEHRTCPMCKCDILK 302 zebrafish
Q8N7C7       256 DNCVVCFDTYKPqDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDILK 304 human
Q8WVZ7       254 DSCVICFERYKPnDIVRILTCKHFFHKNCIDPWILPHGTCPICKCDILK 302 human
Q8AWW4       258 DSCAVCIEPYKPsDVVRILTCNHFFHKNCIDPWLLEHRTCPMCKCDILK 306 African clawed frog
XP_420351    356 DSCAVCIELYKPnEVVRILTCNHLFHKNCIDPWLLEHRTCPMCKCDILK 404 chicken
XP_021336982 200 TGCVVCTDSYQRgEQVTVLPCRHLYHKKCIEPWLLEHPTCPMCKYNILK 248 zebrafish
XP_010209132  91 EICGVCLEPFQLkEVVGVLTCKHLFHKRCVDPWLLEHRTCPLCKWDILK 139 speckled mousebird

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