Conserved Protein Domain Family
RING-HC_MIB2_rpt1

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cd16726: RING-HC_MIB2_rpt1 
first RING finger, HC subclass, found in mind bomb 2 (MIB2) and similar proteins
MIB2, also known as novel zinc finger protein (Novelzin), putative NF-kappa-B-activating protein 002N, skeletrophin, or zinc finger ZZ type with ankyrin repeat domain protein 1, is a large, multi-domain E3 ubiquitin-protein ligase that promotes ubiquitination of the cytoplasmic tails of Notch ligands. It promotes Delta ubiquitylation and endocytosis in Notch activation. Overexpression of MIB2 activates NF-kappaB and interferon-stimulated response element (ISRE) reporter activity. Moreover, MIB2 acts as a novel component of the activated B-cell CLL/lymphoma 10 (BCL10) complex and controls BCL10-dependent NF-kappaB activation. It also functions as a founder myoblast-specific protein that regulates myoblast fusion and muscle stability. MIB2 contains an MZM region with two Mib-Herc2 domains flanking a ZZ zinc finger, a REP region including two tandem Mib repeats, an ANK region that spans ankyrin repeats, and a RNG region consisting of two C3HC4-type RING-HC fingers. This model corresponds to the first RING-HC finger.
Statistics
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PSSM-Id: 438386
Aligned: 11 rows
Threshold Bit Score: 60.9261
Created: 2-May-2013
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #  #           # #   #  #      #  # 
Q96AX9        888 AECLVCSELallVLFSPCQHRTVCEECARRMKKCIRCQ 925  human
AAI63627      872 SECLICSELallVLFSPCQHSVACEECAHRMKKCIRCQ 909  zebrafish
Q5ZIJ9        828 TECLVCSELallIHFFPCQHSIVCEECSRRMKKCIKCQ 865  chicken
NP_001121336  825 AECIVCSELtalISFFPCQHSIVCEECSRRMKKCIKCQ 862  African clawed frog
NP_609933     918 HECIVCNEIlpmVRFEPCQHQIACEECGIRMKKCLRCA 955  fruit fly
ELU07342       86 VECMSCCEMsncVTFEPCGHMIVCIHCSRRMKKCIKCQ 123  Capitella sp. I Grassle & Grassle, 1976
EFX67756      214 LECIVCYESpptVRFEPCGHIVTCFDCAQRMKKCLKCH 251  common water flea
XP_005986111  816 VECLVCSELallVQFSPCQHSIVCEECSRRMKKCIKCQ 853  coelacanth
XP_007905451  716 SECLVCSELtmlVQFSPCQHCVVCEECALRMKKCIKCQ 753  elephant shark
EEC01148      874 SECQICLEAlatVVFEPCGHRVACEECCSRMKKCLSCQ 911  black-legged tick
XP_013397886  791 PSCKVCEDDpadVKFMPCGHQISCSDCCAKMKKCLECG 828  Lingula anatina

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