Conserved Protein Domain Family
RING-HC_MIB1_rpt2

?
cd16725: RING-HC_MIB1_rpt2 
second RING finger, HC subclass, found in mind bomb 1 (MIB1) and similar proteins
MIB1, also known as DAPK-interacting protein 1 (DIP-1) or zinc finger ZZ type with ankyrin repeat domain protein 2, is a large, multi-domain E3 ubiquitin-protein ligase that promotes ubiquitination of the cytoplasmic tails of Notch ligands, and thus plays an essential role in controlling metazoan development by Notch signaling. It is also involved in Wnt/beta-catenin signaling and nuclear factor (NF)-kappaB signaling, and has been implicated in innate immunity, neuronal function, genomic stability, and cell death. MIB1 contains an MZM region with two Mib-Herc2 domains flanking a ZZ zinc finger, a REP region including two tandem Mib repeats, an ANK region that spans ankyrin repeats, and a RNG region consisting of three C3HC4-type RING-HC fingers. This model corresponds to the second RING-HC finger.
Statistics
?
PSSM-Id: 438385
Aligned: 12 rows
Threshold Bit Score: 53.2587
Created: 3-May-2013
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1           #  #           # #   #  #      #  # 
Q86YT6        864 EECVVCSDKKAAVLFQPCGHMCACENCANLMKKCVQCR 901  human
Q804S5        862 EECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCR 899  zebrafish
Q6GNY1        865 EECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCR 902  African clawed frog
ELU05910      132 EECVVCSDRKASMLFKPCGHMCACDGCGALMKKCVQCL 169  Capitella sp. I Grassle & Grassle, 1976
EFX89996      257 EECVVCSDKKASVLFRPCGHMCACDGCAALMKKCVQCR 294  common water flea
KFM59314      209 EECVVCSDKRASVLFKPCGHMCACDGCAALMKKCVQCR 246  Stegodyphus mimosarum
XP_006814876  824 EECVVCSDKKASTLFEPCGHMCACDSCAALMKKCVQCR 861  Saccoglossus kowalevskii
XP_007899833  864 EECVVCSDKKAAVLFQTCGHMCACENCASLMKKCVQCR 901  elephant shark
XP_009862485  967 EECCVCSDKQSSVVFKPCGHICACQACSNLMKKCIRCR 1004 vase tunicate
Q9VUX2       1015 DECLVCSDRRAAVFFRPCGHMVACEHCSALMKKCVLCR 1052 fruit fly
EDO44606       59 EECMVCSEKKSQLLFKPCNHMVACEGCGSLMKKCIQCR 96   starlet sea anemone
XP_013418704  867 EECVVCSDKKASILFKPCGHMCACDGCAALMKKCVQCR 904  Lingula anatina

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap