Conserved Protein Domain Family
RING-HC_MEX3D

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cd16723: RING-HC_MEX3D 
RING finger, HC subclass, found in RNA-binding protein MEX3D
MEX3D, also known as RING finger and KH domain-containing protein 1 (RKHD1), RING finger protein 193 (RNF193), or TINO, is an RNA-binding phosphoprotein that controls the stability of the transcripts coding for the anti-apoptotic protein BCL-2, and negatively regulates BCL-2 in HeLa cells. MEX3D contains two K homology (KH) domains that provide RNA-binding capacity, and a C-terminal C3HC4-type RING-HC finger. Like other MEX-3 family proteins, MEX3D shuttles between the nucleus and the cytoplasm via the CRM1-dependent export pathway.
Statistics
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PSSM-Id: 438383
Aligned: 4 rows
Threshold Bit Score: 128.111
Created: 20-Mar-2015
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structure of Homo sapiens MEX3C with bound Zn2+ ions through its RING-HC finger
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                    #  #           # #   #  #           #  #            
Q86XN8       588 PSASSAPALARECVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIHIFS 651 human
EMP27553     508 SSSDGHRKSSRECMVCFESEVIAALVPCGHNLFCMECAIRICGKAEPECPACHTPATQAIHSLS 571 green sea turtle
NP_001089119 377 SNSEGQHKCVRDCVVCCESEVIAALVPCGHNLFCMECAIRICEQELPECPSCHAPATQAIRIFS 440 African clawed frog
XP_005992004 554 SSSDGRRKSTRDCIICFESEIIAALVPCGHNLFCMECAIRLCEKPDPECPVCHTPATQAIRIFS 617 coelacanth

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