Conserved Protein Domain Family
RING-H2_RNF130-like

?
cd16668: RING-H2_RNF130-like 
RING finger, H2 subclass, found in RING finger proteins, RNF130, RNF149, RNF150 and similar proteins
This subfamily includes RING finger proteins, RNF130, RNF149 and RNF150, which belong to a larger PA-TM-RING ubiquitin ligase family that has been characterized by an N-terminal signal peptide, a protease-associated (PA) domain, a transmembrane (TM) domain and a C-terminal C3H2C3-type RING-H2 finger domain followed by a putative PEST sequence. RNF130, also known as Goliath homolog (H-Goliath), is a paralog of RNF128. It is a transmembrane E3 ubiquitin-protein ligase expressed in leukocytes. It has a self-ubiquitination property and controls the development of T cell clonal anergy by ubiquitination. RNF133 is a testis-specific endoplasmic reticulum-associated E3 ubiquitin ligase that may play a role in sperm maturation through an ER-associated degradation (ERAD) pathway. RNF149, also known as DNA polymerase-transactivated protein 2, is an E3 ubiquitin-protein ligase that induces the ubiquitination of wild-type v-Raf murine sarcoma viral oncogene homolog B1 (BRAF) and promotes its proteasome-dependent degradation. RNF150 polymorphisms may be associated with chronic obstructive pulmonary disease (COPD) risk in the Chinese population. This subfamily also includes Drosophila melanogaster protein goliath (d-goliath), also known as protein g1, which is one of the founding members of the group. It was originally identified as a transcription factor involved in the embryo mesoderm formation.
Statistics
?
PSSM-Id: 438330
Aligned: 11 rows
Threshold Bit Score: 99.3884
Created: 30-Mar-2015
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H H C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-H2 fingers with bound zinc
  • Comment:C3H2C3-type RING-H2 finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-H-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1         #  #              # #  #  #          #  #    
Q86XS8       263 HCAVCIESYKqnDVVRILPCKHVFHKSCVDPWLsEHCTCPMCKLNI 308 human
Q06003       302 CCAICIEAYKptDTIRILPCKHEFHKNCIDPWLiEHRTCPMCKLDV 347 fruit fly
EFX70577     260 CCAVCIEPYKasDVVRLLPCRHEFHKVCVDPWLlEHRTCPMCKMDI 305 common water flea
ELT95899     258 QCAVCIESYRasDVIRILPCKHMFHKSCVDPWLiEQRSCPMCKLDI 303 Capitella sp. I Grassle & Grassle, 1976
Q9ULK6       277 NCAVCIEGYKpnDVVRILPCRHLFHKSCVDPWLlDHRTCPMCKMNI 322 human
EEC05345     120 CCAVCIEPFRlgEVVRLLPCKHTFHKSCVDPWLlEQRSCPMCKMDI 165 black-legged tick
Q8NC42       268 NCAVCIENFKvkDIIRILPCKHIFHRICIDPWLlDHRTCPMCKLDV 313 human
NP_497129    226 DCAVCLDPYQlqDVIRLLPCKHIYHKSCIDPWLlEHRTCPMCKNDI 271 Caenorhabditis elegans
XP_013416608 285 QCAVCIENYRphEVVRILPCRHMFHKSCVDPWLlEQRSCPICKTDI 330 Lingula anatina
XP_006820823 186 CCAVCIDPYKsgEVIRVLPCKHLFHKACVDQWLvEHRTCPMCKLNI 231 Saccoglossus kowalevskii
XP_785546    260 ACPICLEFYRisDILRVLPCKHSYHKTCVDQWLvENRTCPMCKLNI 305 purple sea urchin

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap