Conserved Protein Domain Family
RING-HC_TRIM17_C-IV

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cd16595: RING-HC_TRIM17_C-IV 
RING finger, HC subclass, found in tripartite motif-containing protein TRIM17 and similar proteins
TRIM17, also known as RING finger protein 16 (RNF16) or testis RING finger protein (Terf), is a crucial E3 ubiquitin ligase that is necessary and sufficient for neuronal apoptosis and contributes to Mcl-1 ubiquitination in cerebellar granule neurons (CGNs). It interacts in a SUMO-dependent manner with nuclear factor of activated T cell NFATc3 transcription factor, and thus inhibits the activity of NFATc3 by preventing its nuclear localization. In contrast, it binds to and inhibits NFATc4 transcription factor in a SUMO-independent manner. Moreover, TRIM17 stimulates degradation of kinetochore protein ZW10 interacting protein (ZWINT), a known component of the kinetochore complex required for the mitotic spindle checkpoint, and negatively regulates cell proliferation. TRIM17 belongs to the C-IV subclass of the TRIM (tripartite motif) family of proteins that are defined by their N-terminal RBCC (RING, Bbox, and coiled coil) domains, including three consecutive zinc-binding domains, a C3HC4-type RING-HC finger, Bbox1 and Bbox2, and a coiled coil region, as well as a B30.2/SPRY (SplA and ryanodine receptor) domain positioned C-terminal to the RBCC domain.
Statistics
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PSSM-Id: 438257
Aligned: 5 rows
Threshold Bit Score: 114.317
Created: 25-Apr-2016
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               #  #           # #  #  #                      #  #             
Q9Y577         9 KLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKargkkgrrkrkgsFPCPECREMSPQRNLLPNR 78  human
XP_008059794   9 RLQEEATCSICLDYFTDPVMTTCGHNFCRECIRLSWEKargkkgrrrqkdaFPCPECRELFPQRNLRPNR 78  Philippine tarsier
NP_112449      9 RLQEEATCSICLDYFTDPVMTACGHNFCRECIQMSWEKgkvkkgkkkqkgsFPCPECREMSPQRNLRPNR 78  house mouse
XP_030045182   9 SLRDEASCSICLDYFTDPVTTDCGHNFCRSCITQSWEGrd---------tnYPCPQCRAMSPQRNLRPNR 69  Microcaecilia unicolor
NP_001092822 132 NLQDEATCSVCLEFFKDPVSIECGHNFCRACIVKSWKDle---------mdFPCPQCREVFQQKSLRPNR 192 chicken

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