Conserved Protein Domain Family
RING-HC_TRIM8_C-V

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cd16580: RING-HC_TRIM8_C-V 
RING finger, HC subclass, found in tripartite motif-containing protein 8 (TRIM8) and similar proteins
TRIM8, also known as glioblastoma-expressed RING finger protein (GERP) or RING finger protein 27 (RNF27), is a probable E3 ubiquitin-protein ligase that may promote proteasomal degradation of suppressor of cytokine signaling 1 (SOCS1) and further regulate interferon-gamma signaling. It functions as a new p53 modulator that stabilizes p53 impairing its association with MDM2 and inducing the reduction of cell proliferation. TRIM8 deficit dramatically impairs p53 stabilization and activation in response to chemotherapeutic drugs. TRIM8 also modulates tumor necrosis factor-alpha (TNFalpha) and interleukin-1beta (IL-1beta)-triggered nuclear factor-kappaB (NF- kappa B) activation by targeting transforming growth factor beta (TGFbeta) activated kinase 1 (TAK1) for K63-linked polyubiquitination. Moreover, TRIM8 modulates translocation of phosphorylated STAT3 into the nucleus through interaction with Hsp90beta and consequently regulates transcription of Nanog in embryonic stem cells. It also interacts with protein inhibitor of activated STAT3 (PIAS3), which inhibits IL-6-dependent activation of STAT3. TRIM8 belongs to the C-V subclass of the TRIM (tripartite motif) family of proteins that are defined by their N-terminal RBCC (RING, Bbox, and coiled coil) domains, including three consecutive zinc-binding domains, a C3HC4-type RING-HC finger, Bbox1 and Bbox2, and a coiled coil domain, as well as an uncharacterized region positioned C-terminal to the RBCC domain. The coiled coil domain is required for homodimerization and the region immediately C-terminal to the RING motif is sufficient to mediate the interaction with SOCS1.
Statistics
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PSSM-Id: 438242
Aligned: 10 rows
Threshold Bit Score: 138.488
Created: 10-Nov-2015
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                     #  #           # #  #  #             #  #             
Q9BZR9         2 AENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKDsglvRCPECNQAYNQKPGLEKN 68  human
NP_001106307   2 AENWKNCFEEELICPICLHVFIEPVQLPCKHNFCRGCISEAWAKEtgmvRCPECNQAYNQKPTLEKN 68  African clawed frog
NP_001265783   2 AESWRNCFEEELICPICLHVFVEPVQLPCKHNFCRGCISEAWAKDaanvRCPECNHAYSQKPNLEKN 68  zebrafish
NP_001026404   2 AENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKEtglvRCPECNQAYNQKPNLEKN 68  chicken
XP_006007437   2 AENWKSCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKEaglvRCPECNQAYNQKPSLEKN 68  coelacanth
XP_007909622   2 AENWKSCFEEELLCPICLQVFSEPVQLPCKHNFCRACIGEAWAKEav-sRCPECNNVYPQKPPLEKN 67  elephant shark
XP_017320197  10 AEAWKNCFEEELICPICLHVFVDPVQLPCKHNFCHSCISEAWAKDvgilRCPECNQPYKQKPSLDKN 76  channel catfish
KAA0725018     3 AENWKNCLEEELICPICLNVFAEPVQLPCKHNFCRVCINEAWSKDagmvRCPECNHAYSQKPSLEKN 69  Triplophysa tibetana
ELK35608       2 AENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKDsglvRCPECNQAYNQKPGLEKN 68  Myotis davidii
XP_020792208   7 AESWRNCFEEELICPICLHVFSEPIQLPCKHNFCRGCISEAWAKDstvtRCPECNHGYAQKPTLEKN 73  great blue-spotted mudskipper

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