Conserved Protein Domain Family
RING-HC_MuRF_C-II

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cd16577: RING-HC_MuRF_C-II 
RING finger, HC subclass, found in muscle-specific RING finger proteins TRIM63/MuRF-1, TRIM55/MuRF-2 and TRIM54/MuRF-3
This subfamily corresponds to a group of striated muscle-specific tripartite motif (TRIM) proteins, including TRIM63/MuRF-1, TRIM55/MuRF-2, and TRIM54/MuRF-3, which function as E3 ubiquitin ligases in ubiquitin-mediated muscle protein turnover. They are tightly developmentally regulated in skeletal muscle and associate with different cytoskeleton components, such as microtubules, Z-disks and M-bands, as well as with metabolic enzymes and nuclear proteins. They also cooperate with diverse proteins implicated in selective protein degradation by the proteasome and autophagosome, and target proteins of metabolic regulation, sarcomere assembly and transcriptional regulation. Moreover, MURFs display variable fibre-type preferences. TRIM63/MuRF-1 is predominantly fast (type II) fibre-associated in skeletal muscle. TRIM55/MuRF-2 is predominantly slow-fibre associated. TRIM54/MuRF-3 is ubiquitously present. They play an active role in microtubule-mediated sarcomere assembly. MuRFs belong to the C-II subclass of the TRIM family of proteins that are defined by their N-terminal RBCC (RING, Bbox, and coiled coil) domains, including three consecutive zinc-binding domains, a C3HC4-type RING-HC finger, Bbox2, and a coiled coil region, as well as a COS (carboxyl-terminal subgroup one signature) box, and an acidic residue-rich (AR) domain positioned C-terminal to the RBCC domain. They also harbor a MURF family-specific conserved box (MFC) between its RING-HC finger and Bbox domains.
Statistics
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PSSM-Id: 438239
Aligned: 9 rows
Threshold Bit Score: 106.518
Created: 3-May-2013
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #            # #  #  #                           #  # 
Q9BYV2        24 LICPICLEMFSKPvVILPCQHNLCRKCANDVFqasnplwqsrgsttvssggrFRCPSCR 82   human
NP_001122372  22 LMCPICLEIYTKPvVILPCQHNLCRKCANDVFqnrgtp--------mgsggrFRCPTCR 72   Ciona intestinalis
Q9BYV6        24 LICPICLEMFTKPvVILPCQHNLCRKCASDIFqasnpylptrggttmasggrFRCPSCR 82   human
Q969Q1        21 LICPICLEMFTKPvVILPCQHNLCRKCANDIFqaanpywtsrgssvsmsggrFRCPTCR 79   human
XP_007909402  24 LICPICLEMFTKPvVILPCQHNLCRKCANDIFqsrgta--------lgsggrFRCPSCR 74   elephant shark
EMP33292     206 LICPICLEVFTKPvVILPCQHNLCRKCANDIFqsrgtt--------lgsagrFRCPSCR 256  green sea turtle
NP_957389     23 LSCPICLDMFTKPvVILPCQHNLCRGCASDLYdsrnpy--------rfsggvFRCPTCR 73   zebrafish
NP_001086683  21 LICPICLEMFNKPvVILPCQHNLCRKCANDVFqagnpywst---rssvsggrFRCPTCR 76   African clawed frog
NP_001091169  24 LICPICLEMFSKPvVILPCQHNLCRKCASDIFqasntylptrggntvasggrFRCPSCR 82   African clawed frog

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