Conserved Protein Domain Family
RING-HC_MIBs

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cd16519: RING-HC_MIBs 
RING finger, HC subclass, found in mind bomb MIB1, MIB2, and similar proteins
MIBs are large, multi-domain E3 ubiquitin-protein ligases that promote ubiquitination of the cytoplasmic tails of Notch ligands. They are also responsible for TBK1 K63-linked ubiquitination and activation, promoting interferon production and controlling antiviral immunity. Moreover, MIBs selectively control responses to cytosolic RNA and regulate type I interferon transcription. Both MIB1 and MIB2 have similar domain architectures, which consist of two Mib-Herc2 domains flanking a ZZ zinc finger, a REP region including two tandem Mib repeats, an ANK region that spans ankyrin repeats, and a RNG region, where MIB1 and MIB2 contain three and two C3HC4-type RING-HC fingers, respectively. This model corresponds to the first RING-HC finger of MIB1 and MIB2, as well as the second RING-HC finger of MIB1.
Statistics
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PSSM-Id: 438182
Aligned: 7 rows
Threshold Bit Score: 62.4972
Created: 7-May-2013
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #  #           # #   #  #        #  # 
Q86YT6        817 EECMVCSDMkrdtLFGPCGHIaTCSLCSPRv--KKCLICK 854  human
Q96AX9        888 AECLVCSELallvLFSPCQHRtVCEECARRm--KKCIRCQ 925  human
Q86YT6        864 EECVVCSDKkaavLFQPCGHMcACENCANLm--KKCVQCR 901  human
XP_002736376  827 HDCRMCSKPvn-cQFQPCGHMvACMDCSLVf--KKCFQCK 863  Saccoglossus kowalevskii
KOF83884      191 KDCLLCSDKqatvKFQPCGHVvTCEDCSLKimiKKCIQCK 230  Octopus bimaculoides
NP_001121594  669 YPCRSCNQTac-vKFDPCGHVvVCKKCSYIv--KKCLQCG 705  Ciona intestinalis
KFD54936      894 GVCAMCSKQkistLFRPCGHCcACKECALLm--NKCMCCR 931  pig whipworm

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