Conserved Protein Domain Family
RING-H2_DZIP3

?
cd16460: RING-H2_DZIP3 
RING finger, H2 subclass, found in DAZ (deleted in azoospermia)-interacting protein 3 (DZIP3) and similar proteins
DZIP3, also known as RNA-binding ubiquitin ligase of 138 kDa (RUL138) or 2A-HUB protein, is an RNA-binding E3 ubiquitin-protein ligase that interacts with coactivator-associated arginine methyltransferase 1 (CARM1) and acts as a transcriptional coactivator of estrogen receptor (ER) alpha. It is also a histone H2A ubiquitin ligase that catalyzes monoubiquitination of H2A at lysine 119, functioning as a combinatorial component of the repression machinery required for repressing a specific chemokine gene expression program, critically modulating migratory responses to Toll-like receptors (TLR) activation. DZIP3 contains a C3H2C3-type RING-H2 finger at the C-terminus.
Statistics
?
PSSM-Id: 438123
Aligned: 4 rows
Threshold Bit Score: 86.4411
Created: 6-Jan-2016
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H H C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-H2 fingers with bound zinc
  • Comment:C3H2C3-type RING-H2 finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-H-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1           #  #                      # #  #  #          #  #    
Q86Y13       1146 EPCVICHENLsp---------enLSVLPCAHKFHAQCIRPWLMQQGTCPTCRLHV 1191 human
XP_007893993  937 EPCVICHEEFss---------esILALPCAHKFHSQCIGPWLKEQRTCPTCRLHV 982  elephant shark
XP_003056373  505 TLCIVCHEWIelkcvgggdgrdlAMPLPCGHIFHRSCILPWLLNSTTCPTCRASV 559  Micromonas pusilla CCMP1545
OSX75749      252 TQCVICFDAFqdg--------drLLVLPCNHEFHTACAGPWFDGHQTCPSCRGPV 298  laver

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap