1WGM,1T1H,2BAY,2C2V,3L1Z,4WZ3,7ABI,4WZ3,7C96,5M88


Conserved Protein Domain Family
RING-Ubox

?
cd16453: RING-Ubox 
Click on image for an interactive view with Cn3D
U-box domain, a modified RING finger
The U-box protein family is a family of E3 enzymes that also includes the HECT family and the RING finger family. The E3 enzyme is ubiquitin-protein ligase that cooperates with a ubiquitin-activating enzyme (E1) and a ubiquitin-conjugating enzyme (E2), and plays a central role in determining the specificity of the ubiquitination system. It removes the ubiquitin molecule from the E2 enzyme and attaches it to the target substrate, forming a covalent bond between ubiquitin and the target. U-box proteins are characterized by the presence of a U-box domain of approximately 70 amino acids. The U-box is a modified form of the RING finger domain that lacks metal chelating cysteines and histidines. It resembles the cross-brace RING structure consisting of three beta-sheets and a single alpha-helix, which would be stabilized by salt bridges instead of chelated metal ions. U-box proteins are widely distributed among eukaryotic organisms and show a higher prevalence in plants than in other organisms.
Statistics
?
PSSM-Id: 438117
Aligned: 45 rows
Threshold Bit Score: 44.082
Created: 20-Apr-2015
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1WGM_A         23 FLDPIMStl----mcDPVVLpsSRVTVDrSTIARHLlsd----------------------------------------- 57   human
2BAY_A          4 MLCAISGkv----prRPVLSpkSRTIFEkSLLEQYVkdt----------------------------------------- 38   baker's yeast
7ABI_t         40 DHCSLSLqp----fvYPVCTp-DGIVFDlLNIVPWLkky----------------------------------------- 73   human
O94941        263 FLDPITLei----mpCPMLLp-SGKVIDqSTLEKCNrseatw-------------------------------------- 299  human
Q9Y314         44 DCCCLSLqp----chDPVVTp-DGYLYErEAILEYIlhqkkeiarqmkayekqrgtrreeqkelqraasqdhvrgfleke 118  human
Q9Y314        221 YVCAVTRdslsnatpCAVLRp-SGAVVTlECVEKLIrkd----------------------------------------- 258  human
XP_006817456  965 LICPLTKel----fvDPVVTp-YGHVYErHAIEDHLsks----------------------------------------- 998  Saccoglossus ...
XP_014353347  414 LSCPLTKsl----fiDPVRTp-AGNVYErRAIEDHLkrn----------------------------------------- 447  coelacanth
PSC68729      279 LLCPLTLsp----fiDPVLTt-AGHVYErAAITAHMels----------------------------------------- 312  Micractinium ...
5M88_A          1 MLCALSGei----peEPVVSkkTGVLFEkRLILKYLeeh----------------------------------------- 35   Chaetomium th...
1WGM_A         58 ----------------------------------------------------------------qtDPFNRSPL 67   human
2BAY_A         39 ----------------------------------------------------------------gnDPITNEPL 48   baker's yeast
7ABI_t         74 ----------------------------------------------------------------gtNPSNGEKL 83   human
O94941        300 -------------------------------------------------------------grvpsDPFTGVAF 312  human
Q9Y314        119 saivsrplnpftakalsgtspddvqpgpsvgppskdkdkvlpsfwipsltpeakatklekpsrtvtCPMSGKPL 192  human
Q9Y314        259 ----------------------------------------------------------------mvDPVTGDKL 268  human
XP_006817456  999 ----------------------------------------------------------------nyDPMAKKPL 1008 Saccoglossus kowale...
XP_014353347  448 ----------------------------------------------------------------ktDPLNGKPL 457  coelacanth
PSC68729      313 ----------------------------------------------------------------nlDPMSRQPL 322  Micractinium conduc...
5M88_A         36 ---------------------------------------------------------------nniEPGTTEEL 46   Chaetomium thermoph...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap