3HLU


Conserved Protein Domain Family
YitT_C_like
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cd16379: YitT_C_like 
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C-terminal domain of Bacillus subtilis YitT and similar protein domains
This domain, found in various bacterial proteins, has no known function. It has been given the designation DUF2179 and occurs at the C-terminus of the Bacillus subtilis membrane protein YitT as well as in single-domain proteins.
Links
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Statistics
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PSSM-Id: 319863
Aligned: 543 rows
Threshold Bit Score: 49.7464
Created: 29-Mar-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved Features/SitesClick to see Conserved Features Help
 
dimer interface
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:dimer interface [polypeptide binding site]
Evidence:
  • Structure:3HLU: DUF2179 protein from Eubacterium ventriosum forms homodimer, contacts at 4A
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Feature 1            #                          ###    # #               #  ##     #### #        
3HLU_A         8 QTXVYIVSa-kRKIIADRXLQELdLGVTXLQAVGayknNETEVIXCVXrKATLVKVRNLLKEVdpdAFXIVStANEVFGE 86  Eubacterium ven...
WP_051688042 108 FVSLQIFPrraKTGEAINRLRAEgFGVTSVVGTGr--sGPRTILYVIVkRKDLIKVQNVLDQIdpkIFYNISdARSIRGG 185 Desulfotomaculu...
WP_011878822  94 HLSMQVYPspgNTTELCNRFREQgFGVTTVSGCGr--nGERTILFVLLkRSNLKLATQILDEIqpgIFFNISdARAVRGG 171 Desulfotomaculu...
ACA60394     114 FVCLQVFPpvtQVDELTALFRKEgFGVTLVTGEGr--dGYRKILFLFMkRKNLPRALKVLNGHdpkCFFSVSdARSMRGG 191 Candidatus Desu...
WP_004092322  96 YVAIQIFPsqdYCQDLLDRLRKSdFGFTSLSGQGr--sGPREVFIVTVkRKDLPRILQILDETapdTFFNISdVRSIRGG 173 Acetonema longum
WP_018086686  94 YATIQVFPqkeCVQQIITALRNQgFGVTSVLGEGr--dGERVILFVTLkRKDMPEAIKLLEKIepcIFYSVVdTRQIHGG 171 Desulfurispora ...
KJS10931      73 FLSVHIIPpreMVEEFTRLMRDEgFGITAVQGCGr--dGERTMLFVMIkRKDLNKALNLINCHcpnAFFNVSdARRIHGG 150 Peptococcaceae ...
WP_013822483  94 YLSLQVFPapqLASQFIERLRQEgFGVTSVECQGq--cGVRTVLFVLLkRRDLQRALSILNKLdpnTFFNVSdARLIHGG 171 Desulfotomaculu...
KJS14941      94 FLSLQIFPkadKVKEIIEGLRTQgFGVTSVHGEGr--dGDRIILFVNLkRKDLDRALDLLECIqsgAFYHISdTRGIRGG 171 Peptococcaceae ...
KUK41763      94 FMSLQIFPpaeLVAEITGALRKQgFGVTQVLGEGr--hGPRTILFVTLkRKDLGKVLRYLDNLgteVFYSVAdARAIHGG 171 Clostridia bact...

Feature 1          
3HLU_A        87 GF 88  Eubacterium ventriosum ATCC 27560
WP_051688042 186 VF 187 Desulfotomaculum alkaliphilum
WP_011878822 172 VF 173 Desulfotomaculum reducens
ACA60394     192 II 193 Candidatus Desulforudis audaxviator MP104C
WP_004092322 174 IF 175 Acetonema longum
WP_018086686 172 VF 173 Desulfurispora thermophila
KJS10931     151 VF 152 Peptococcaceae bacterium BRH_c8a
WP_013822483 172 IF 173 Desulfotomaculum kuznetsovii
KJS14941     172 VF 173 Peptococcaceae bacterium BRH_c4b
KUK41763     172 TF 173 Clostridia bacterium 62_21

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