2BM1,4KBT,3ZZU,2RDO,4FN5,1WDT


Conserved Protein Domain Family
EFG_III

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cd16262: EFG_III 
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Domain III of Elongation Factor G (EFG)
This model represents domain III of bacterial Elongation factor G (EF-G), and mitochondrial Elongation factor G1 (mtEFG1) and G2 (mtEFG2), which play an important role during peptide synthesis and tRNA site changes. In bacteria, this translocation step is catalyzed by EF-G_GTP, which is hydrolyzed to provide the required energy. Thus, this action releases the uncharged tRNA from the P site and transfers the newly formed peptidyl-tRNA from the A site to the P site. Eukaryotic cells harbor 2 protein synthesis systems: one localized in the cytoplasm, the other in the mitochondria. Most factors regulating mitochondrial protein synthesis are encoded by nuclear genes, translated in the cytoplasm, and then transported to the mitochondria. The eukaryotic system of elongation factor (EF) components is more complex than that in prokaryotes, with both cytoplasmic and mitochondrial elongation factors and multiple isoforms being expressed in certain species. mtEFG1 and mtEFG2 show significant homology to bacterial EF-Gs. Mutants in yeast mtEFG1 have impaired mitochondrial protein synthesis, respiratory defects, and a tendency to lose mitochondrial DNA. No clear phenotype has been found for mutants of the yeast homolog of mtEFG2, MEF2.
Statistics
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PSSM-Id: 293919
Aligned: 108 rows
Threshold Bit Score: 94.0594
Created: 23-Jul-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2BM1_A       405 PEPVIDVAIEPKtKADQEKLSQALARLAEEDPTFRVSTHPEtGQTIISGMGELHLEIIVDRLKReFKVDANVGKPQ 480 Thermus thermophilus
YP_002248397 401 SEPIISYAIAPKtRGDEEKVSAGLHKLLEEDPTLKFSRDEEsKDMILSGMGQVHIEVALEKLKRkFGVEVNLMAPK 476 Thermodesulfovibrio...
YP_002352727 400 PEPVFAVAVVPKtRADEDRMSTAIARILEEDPTLRVQRNIEtNETLIYGLGDSHLEVVVERMQRkFGVNVTLGTPQ 475 Dictyoglomus turgid...
Q1IH98       403 AEPAITYAIEPKtRADEDKLSNGIHKMMEEDALLRFFRDPQtKEFLVAGTGQQHIEVVVSKLKKrYHTEVILKAPK 478 Candidatus Koribact...
Q2YZP5       401 PPPIMSYAMEPKtRGDEDKIASSIHRLTEEDPTIVFSRNVEtKEMILSGMGQVHIEVNIEKMKRkFGVEVNLNTPK 476 uncultured delta pr...
NP_952982    402 LQPVISYAVQPKtKNDEDKIHGALQRLMEEDQTIQVRRDEKtRELILSGMGQVHLEVTIEKLKRkFNVDVEMKTQK 477 Geobacter sulfurred...
YP_001636285 402 PAPAFIATVKPRsRSDLDKLSSALTRMTEEDPSLHVSRDPRtGEALLSGLSETHLQIIAERMKRkFDVNIDLELPR 477 Chloroflexus aurant...
YP_001255997 400 PKANMTMAALPKsKNDEDKMFYALDKLVEEDPTIYISRDLEnAETLISGMGDIHLEVIANRVKNkFGTEIVLDSPK 475 Clostridium botulin...
NP_602373    401 PKPNIYSGVLPAdKNDDEKLSTAIQRVMEEDPTFVMSRNYEtKQLLIGGQGEKHLYIILCKIKNkFGVHAELENVI 476 Fusobacterium nucle...
YP_010102    395 PPQLISYALAPKeKGEEDKVFAAMHKLLDEDVTLRLSRDGEsSDILVSGMGQLHIELSVEKARRrYKAEILLKTPK 470 Desulfovibrio vulga...
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