4QJT,2YWG,3CB4,3DEG


Conserved Protein Domain Family
EF4_III

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cd16260: EF4_III 
Click on image for an interactive view with Cn3D
Domain III of Elongation Factor 4 (EF4)
Elongation factor 4 (EF4 or LepA) is a highly conserved guanosine triphosphatase found in bacteria and eukaryotic mitochondria and chloroplasts. EF4 functions as a translation factor, which promotes back-translocation of tRNAs on posttranslocational ribosome complexes and competes with elongation factor G for interaction with pretranslocational ribosomes, inhibiting the elongation phase of protein synthesis.
Statistics
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PSSM-Id: 293917
Aligned: 49 rows
Threshold Bit Score: 129.156
Created: 23-Jul-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
S12 interface
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:S12 interface [polypeptide binding site]
Evidence:
  • Structure:3DEG; Escherichia coli 70S ribosome EF4 complex, EF4 binds ribosomal protein S12, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                   #   #               ####     ##                               
4QJT_y    368 PVVFAGLYPvdSGDYGKLRDALEKLKLNDAALTFEPESStALGFGFRCGFLGLLHAEIVQERLEREFGLSLIATAP 443 Thermus thermophilus HB8
3DEG_C    293 PQVYAGLFPvsSDDYEAFRDALGKLSLNDASLFYEPESSsALGFGFRCGFLGLLHMEIIQERLEREYDLDLITTAP 368 Escherichia coli K-12
D2VRR7    397 PMVYAGIYPlnTAEFDKLRDVIDKLLLTDRSVTIEKETSaALGTGFRCGFLGLLHMDVFKQRLAQEFTIETIITAP 472 Naegleria gruberi stra...
P46943    338 PMVFVGAFPadGIEFKAMDDDMSRLVLNDRSVTLERETSnALGQGWRLGFLGSLHASVFRERLEKEYGSKLIITQP 413 Saccharomyces cerevisi...
Q38BU9    456 PVVFAGFYPdeGEYVTQLREAVEKLRMNDPAVTVEPLECqALGSGLQLGFLGVLHMQIFQERLLSEFGQRVLVTPP 531 Trypanosoma brucei TRE...
Q7S0P6    413 PMVFVAAFPtnQDDYGRLADSIAHLVLNDRSVTLQKDYSeALGAGWRLGFLGSLHCSVFQDRLRQEHGASIIITEP 488 Neurospora crassa OR74A
Q6C255    343 PMVFVGVFPgeGMDFADLEESLQHLTLNDRSVTMTKATSqALGQGWRMGFLGTLHASVFEDRLLQEHGAHVIITAP 418 Yarrowia lipolytica CL...
B0G189    378 QMVFAGIYPvdSLDYTQLRESFEKLMLTDSSISMTNETSvALGMGFRCGFLGLLHMDVVLQRLEQEYGQVVIATPP 453 Dictyostelium discoide...
P34617    326 PTVYAGLFPveTSDYESLKQAVERLCLNDPSVTVIPDSSkALGLGWRIGFLGVLHMEVFGARLSQEYDASVILCQP 401 Caenorhabditis elegans
B0CS18    317 AMVFAGVFPvdNSDFPKLEESINRLTLTDRSVTIQRESSsALGQGCRLGFLGTLHMDVFRQRLEDEYDANIIITAP 392 Laccaria bicolor S238N...

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