Conserved Protein Domain Family
7tmA_GPR162

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cd15906: 7tmA_GPR162 
G protein-coupled receptor 162, member of the class A family of seven-transmembrane G protein-coupled receptors
This subgroup represents the orphan G-protein coupled receptor 162 (GPR162), also called A-2 or GRCA, with unknown endogenous ligand and function. Phylogenetic analysis indicates that GPR162 and GPR153 share a common evolutionary ancestor due to a gene duplication event. Although categorized as members of the rhodopsin-like class A GPCRs, both GPR162 and GPR153 contain HRM-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of class A receptors and important for efficient G protein-coupled signal transduction. Moreover, the LPxF motif, a variant of NPxxY motif that plays a crucial role during receptor activation, is found at the end of TM7 in GPR162 and GPR153. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.
Statistics
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PSSM-Id: 320572
Aligned: 3 rows
Threshold Bit Score: 500.653
Created: 20-Nov-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of some class A family members with bound ligands (peptides or chemicals), agonists, or antagonists
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                 #  ##                 #
Q16538        14 RSNALSWLACGLLALLANAWIILSISAKQQkh---kpLELLLCFLAGTHILMAAVPLTTFAVVQLRRQassDYDWNESiC 90  human
XP_416511     11 HNNSLWWLACGMLALLANSWIILSITAKQQkh---kpLELLLCFLAGTHILMAAVPLTTYAVVQLRREs-sNYDWNESiC 86  chicken
XP_002941728  15 QNNSLSWLACGALALLANGWSILSLASRGGsgqrprpLELLLCLLAGTHLLMAAIPLSLFSVVQLRHKh-sGYEWNEGlC 93  western clawed ...
Feature 1        ##### ##  #                                            # #####                  
Q16538        91 KVFVSTYYTLALATCFTVASLSYHRMWMVRWPvnYRLSNAKKQALHAVMGIWMVSFILSTLPSIGWHNNGERYYargCQF 170 human
XP_416511     87 KVFVSTYYTLALATCFTVASLSYHRMWMVRWPvnYRLSNAKKQALHAVMGIWMVSFILSTLPSIGWHNNGERYYargCQF 166 chicken
XP_002941728  94 KVFVSTYYTLALSTCLTVACLSYHRMWMVRWPvsYRLGGARRQALQGALGIWAASFVLSTLPSIGWHDNARRFYtrgCHF 173 western clawed ...
Feature 1              #  ### ### ##                                                             
Q16538       171 IVSKIGLGFGVCFSLLLLGGIVMGLVCVAITFYQTLWarprrarqarrvgggggtkaggpgalgtrpaFEVPAIVVEDAR 250 human
XP_416511    167 IVSKIGLGFGVCFSLLLLGGIVMGLVCVGITFYQTLWahrrrrqcchqrp------eeasscssahntFNVPAIVVEDVR 240 chicken
XP_002941728 174 LASRIGLGFGLCFQLLLLGGVGTGLGCLGVTIYHACCcpasgqrgg-------------ageggvegkIEVPAIVVQDAQ 240 western clawed ...
Feature 1                                         #  ## ##  #       ## ###  #  ##                
Q16538       251 GKRRSSLDGSesAKTSLQVTNLVSAIVFLYDSLTGVPILVVSFFSLKSDsaPPWMVLAVLWCSMAQTLLLPSFIWSCERY 330 human
XP_416511    241 GKRRSSLDGSesAKTSLQMTNLISAIVFLYDTLTGVPILVVSFFSLRYDtaPTWMVLAVLWCSMVQTLLLPSFIWSCERY 320 chicken
XP_002941728 241 GKRRSSLDGSesPRTAAQVTGLVGGIVLLYDALTGLPILVVSFVSLRYDstPPWMVLCVLWCSMAQTLLLPSFIWSCARY 320 western clawed ...
Feature 1             
Q16538       331 RADVR 335 human
XP_416511    321 RADLR 325 chicken
XP_002941728 321 RADLR 325 western clawed frog

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