Conserved Protein Domain Family
SNARE_syntaxin19

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cd15879: SNARE_syntaxin19 
SNARE motif of syntaxin 19
Syntaxin 19 has been shown to have the potential to form SNARE complexes with SNAP-23, 25 and 29 (Qb/Qc) and VAMP3 and VAMP8 (R-SNARE), indicating a role in post-Golgi trafficking or plasma membrane fusion. Syntaxin 19 is member of the Qa subgroup of SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) proteins, which consist of coiled-coil helices (called SNARE motifs) that mediate the interactions between SNARE proteins, and a transmembrane domain. The SNARE complexes mediate membrane fusion, important for trafficking of newly synthesized proteins, recycling of pre-existing proteins and organelle formation. SNARE proteins are classified into four groups, Qa-, Qb-, Qc- and R-SNAREs, depending on whether the residue in the hydrophilic center layer of the four-helical bundle is a glutamine (Q) or arginine (R). Qa-, as well as Qb- and Qc-SNAREs, are localized to target organelle membranes, while R-SNARE is localized to vesicle membranes. They form unique complexes consisting of one member of each subgroup, that mediate fusion between a specific type of vesicles and their target organelle.
Statistics
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PSSM-Id: 277232
Aligned: 5 rows
Threshold Bit Score: 92.2071
Created: 5-Apr-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
heterotetramerzero layer
Feature 1:heterotetramer interface [polypeptide binding site]
Evidence:
  • Comment:based on homology to other members of the family

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # ## ###### ### ## ### ## ### ## ###### ###### ###### ### 
NP_001084658 208 QLTEIEQRHKELVHLENQMNDLKDIFLQISLLVEEQGGMINNIELSTQNTENYVQETTEKFRL 270 African clawed frog
NP_001001850 208 QLSEIEQRHKELVNLENQIKDLRDLFIQISLLVEEQGESINNIEMTVNSTKEYVNNTKEKFGL 270 human
CAF91646      95 YAALKRKFQQELLSLENSMKELHDLFVEIFMLVEEQGMFIDHIQVNVEGTQDYVDASNEKFKL 157 spotted green pufferfish
EMC84554     208 QLSEIEQRQKELVNLENQIKDLKELFRQISVLVEEQGEMINNIEISMNNTQEYTQVSKEKFGL 270 domestic pigeon
XP_001233073 207 QLSEIEQRHKELISLESQIKDLKELFIQISVLVEEQGEMINNIEISMNNTQEYTQISREKFGL 269 chicken

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