Conserved Protein Domain Family
SPRY_PRY_TRIM22

?
cd15824: SPRY_PRY_TRIM22 
PRY/SPRY domain in tripartite motif-containing protein 22 (TRIM22), also known as RING finger protein 94 (RNF94) or Stimulated trans-acting factor of 50 kDa (STAF50)
This domain, consisting of the distinct N-terminal PRY subdomain followed by the SPRY subdomain, is found at the C-terminus of TRIM22, also known as RING finger protein 94 (RNF94) or STAF50 (Stimulated trans-acting factor of 50 kDa). TRIM6 domain is composed of RING/B-box/coiled-coil core and also known as RBCC protein. TRIM22 is an interferon-induced protein, predominantly expressed in peripheral blood leukocytes, in lymphoid tissue such as spleen and thymus, and in the ovary.TRIM22 plays an integral role in the host innate immune response to viruses; it has been shown to inhibit the replication of a number of viruses, including HIV-1, hepatitis B, and influenza A. TRIM22 inhibits influenza A virus (IAV) infection by targeting the viral nucleoprotein for degradation; it represents a novel restriction factor up-regulated upon IAV infection that curtails its replicative capacity in epithelial cells. Altered TRIM22 expression has also been associated with multiple sclerosis, cancer, and autoimmune disease. A large number of high-risk non-synonymous (ns)SNPs have been identified in the highly polymorphic TRIM22 gene, most of which are located in the SPRY domain and could possibly alter critical regions of the SPRY structural and functional residues, including several sites that undergo post-translational modification. TRIM22 is a direct p53 target gene and inhibits the clonogenic growth of leukemic cells. Its expression in Wilms tumors is negatively associated with disease relapse. It is greatly under-expressed in breast cancer cells as compared to non-malignant cell lines; p53 dysfunction may be one of the mechanisms for its down-regulation.
Statistics
?
PSSM-Id: 293996
Aligned: 6 rows
Threshold Bit Score: 414.244
Created: 12-Nov-2014
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
ELV13803     266 HWVDVMLNPVNTVSNVVISADqRQVKVVHacmfrnldprDFSAFGVLGCQYFSSGRYYWEVDVSgkvAWILGVHSKRNNp 345 Chinese tree shrew
EFB18404     295 YWVDVMLKPVNAISNIAISADkRQVTAVHnlslkniflcDFSAFDILGCQHFSSGKYYWEVDVSektAWILGVYSKARNl 374 giant panda
ELK38709     651 YWVDLTLNPFNDVSNVVVSEDqRQVTVGNdvmfrnvypcNFSAFDVWGSQNFSSGKCYWEVDVSgkiAWILGVYSKRSNl 730 Myotis davidii
XP_005612168 299 YWVDVMLNPINAISSIIVSADqRQVRVVHpfmfgnifpcDLSAFDILGCQSFSSGKYYWEVDVSgktAWILGVCSNKRKf 378 horse
NP_001186502 295 YWVDVMLNPGSATSNVAISVDqRQVKTVRtctfknsnpcDFSAFGVFGCQYFSSGKYYWEVDVSgkiAWILGVHSKISSl 374 human
XP_007952355 299 YWVNVTLNPVNAPSNVVVSADkREVAVEHicsfrnsnqpDFSAFDVLGCQYFSSGKHYWEVDVSkkiAWILGVYCRMNNs 378 Orycteropus afe...
ELV13803     346 nktksfvGVDFDPnaNHQNVCSRYnPQNGYWVIGLQNefEYNAFEYSSsn-sKILTLSmsvlphRIGVFLDCEaGIVSFF 424 Chinese tree shrew
EFB18404     375 krk-gssGFVFDPnvNHPDVYSRYkPQYGYWVIGLQNesEYKVFEESStsdpKVLTLFmpvppcRIGTFLDYEaRIVSFF 453 giant panda
ELK38709     731 ngk-kssGFVFNPqtNYPNAYSRFrPENGYWVVGLQNasEYNAFEDSFtsdpKVLTLSmavpprRVGVFLDYEaSTVSFF 809 Myotis davidii
XP_005612168 379 nrq-kssGFAFESnlNHPNVYSRYtPQHGYWVVGLQNesEYNAFEDSStsdpKVLTISmavpphRVGVFLDCEgGTVSFF 457 horse
NP_001186502 375 nkr-kssGFAFDPsvNYSKVYSRYrPQYGYWVIGLQNtcEYNAFEDSSssdpKVLTLFmavppcRIGVFLDYEaGIVSFF 453 human
XP_007952355 379 skr-rpfLFAFGPnvNRQNIYARYrPRCGYWVIGLRDqfEYNAFEDSSssdvRILTLSpavpphRVGVFLDYEaGTVSFF 457 Orycteropus afe...
ELV13803     425 NVTNQGSLIYKFSKCcfslPTYPYFNPWNCpGPMTLCPP 463 Chinese tree shrew
EFB18404     454 NVTNHGSLIYKFSNCqfsqTTYPYFNLWNCqRPITVCPP 492 giant panda
ELK38709     810 NVTNHGSLIYKFSKChfsqVVYPYFNPWNCpVPMTLCPP 848 Myotis davidii
XP_005612168 458 NVTNHGSLIYKFSKCrfsdPSYPYFNPWNCpAPMTLCPP 496 horse
NP_001186502 454 NVTNHGALIYKFSGCrfsrPAYPYFNPWNClVPMTVCPP 492 human
XP_007952355 458 NVTNHGSLIYKYSQCcfcqSVYPYFNPCNCpAPMTLCPP 496 Orycteropus afer afer
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap