Conserved Protein Domain Family
SPRY_PRY_TRIM6

?
cd15823: SPRY_PRY_TRIM6 
PRY/SPRY domain in tripartite motif-binding protein 6 (TRIM6), also known as RING finger protein 89 (RNF89)
This domain, consisting of the distinct N-terminal PRY subdomain followed by the SPRY subdomain, is found at the C-terminus of TRIM6, also known as RING finger protein 89 (RNF89). TRIM6 domain is composed of RING/B-box/coiled-coil core and also known as RBCC protein. It is selectively expressed in embryonic stem (ES) cells and interacts with the proto-oncogene product Myc, maintaining the pluripotency of the ES cells. TRIM6, together with E2 Ubiquitin conjugase (UbE2K) and K48-linked poly-Ub chains, is critical for the IkappaB kinase epsilon (IKKepsilon) branch of type I interferon (IFN-I) signaling pathway and subsequent establishment of a protective antiviral response.
Statistics
?
PSSM-Id: 293995
Aligned: 9 rows
Threshold Bit Score: 362.643
Created: 6-Nov-2014
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
ACK77570     299 YWVDVTLDPHTANLNLILSKNrRQMRFVGstlsgpscLEEQYDCSVLGSQHFSSGKYYWEVDVTKKTAWILGVCSHSVep 378  rabbit
AAH65575     206 YWVDVTLNPHTANLNLVLAKNrRQVRFVGakvsgpscLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLgp 285  human
NP_001192112 299 YWVDVTLNPHTANLNLVLAKNrRQVRFVGakvsgpsrLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSVgp 378  Rhesus monkey
NP_001185573 124 YWVDVTLNPHTANLNLVLAKNrRQVRFVGakvsgpscLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLgp 203  human
XP_006162592 298 YWVDVTLNPHTANLNLVLSKNrRQVRFVGaglsgppyAEGHYDCSVLGSQHFSSGKHYWEVDVTKKTAWILGVCSHSErp 377  Chinese tree s...
XP_006885712 299 FWVDVTLNPQTANLNLLLSRNlRQVRFVGdklpgpsyLREHYDCSVLGFQNFSSGKHYWEVDVTNKTDWVLGVCSNSLvp 378  Cape elephant ...
XP_007533567 213 FRVDVTLNPYTATLNLVLSRDlRQVRYVGgelp-gspLDEYYDCSVLGSQHFSSGKHYWEVDVTRKTEWILGVCTHSTep 291  western Europe...
NP_001127162 299 YWVDVTLNPHTANLNLVLAKNrRQVRFVGaklsgpsrLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLgp 378  Sumatran orang...
ELV13572     316 FRVDVTLNPHTANLNLVLSKNrRQVRFVGaglsgppyAEGHYDCSVLGSQHFSSGKHYWEVDVTKKTAWILGVCSHSErp 395  Chinese tree s...
ACK77570     379 aSSFHPAmsQHHTYSRYQPQNGYWVIGLQHKREYRAYEDSSPSLLLSiTVPPRRIGVFLDYEAGTVSFYNVTNHGFPIYT 458  rabbit
AAH65575     286 tFSFNHFaqNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSmTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYT 365  human
NP_001192112 379 tFSFNQYaqNHNAYSRYQPQRGYWVIGLQHNHEYRAYEDSSPSLLLSmTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYT 458  Rhesus monkey
NP_001185573 204 tFSFNHFaqNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSmTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYT 283  human
XP_006162592 378 mFSFDQYgsHESVYSRYRPQSGYWVIGLRRKHDYRAFEDSSTSLLLTmTVPPRRIGVFLDYEAGTVSFYNVTHHGFPIYT 457  Chinese tree s...
XP_006885712 379 eSSFYPYtnNQNVFTGYQPQSGYWVIGLKHNHEYRAYEDSSTSLLLLiTVPPRRVGVFLDYEAGIVSFYNVTNHGLPIYT 458  Cape elephant ...
XP_007533567 292 tLSLSQFshGRNAYSRYQPQSGYWVIGLHHEHEYRAYEDSSTSLLLSmTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYT 371  western Europe...
NP_001127162 379 tFSFNHYaqNHNAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSmTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYT 458  Sumatran orang...
ELV13572     396 mFSFDQYgsHESVYSRYRPQSGYWVIGLRRKHDYRAFEDSSTSLLLTmTVPPRRIGVFLDYEAGTVSFYNVTHHGFPIYT 475  Chinese tree s...
ACK77570     459 FSKYYFpTNVCPYFNPCnCVVPMTLRRP 486  rabbit
AAH65575     366 FSKYYFpTTLCPYFNPCnCVIPMTLRRP 393  human
NP_001192112 459 FSKYYFpTTLCPYFNPCnCVIPMTLRRP 486  Rhesus monkey
NP_001185573 284 FSKYYFpTTLCPYFNPCnCVIPMTLRRP 311  human
XP_006162592 458 FSKYYFpTALCPYFNPCnCGVPMTLRCP 485  Chinese tree shrew
XP_006885712 459 FSKYYFpTPLCPYFNPCnCVVPMTLRYP 486  Cape elephant shrew
XP_007533567 372 FSKISD-SDIGATLKFV-YILESTLGYV 397  western European hedgehog
NP_001127162 459 FSKYYFpTTLCPYFNPCnCVIPMTLRRP 486  Sumatran orangutan
ELV13572     476 FSKYYFpTALCPYFNPCnCGVPMTLRCP 503  Chinese tree shrew
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap