Conserved Protein Domain Family
SPRY_PRY_TRIM4

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cd15809: SPRY_PRY_TRIM4 
PRY/SPRY domain in tripartite motif-binding protein 4 (TRIM4), also known as RING finger protein 87 (RNF87)
This domain, consisting of the distinct N-terminal PRY subdomain followed by the SPRY subdomain, is found at the C-terminus of TRIM4 which is also known as RING finger protein 87 (RNF87). TRIM4 domain is composed of RING/B-box/coiled-coil core and also known as RBCC protein. It is a positive regulator of RIG-I-mediated interferon (IFN) induction. It regulates virus-induced IFN induction and cellular antiviral innate immunity by targeting RIG-I for K63-linked poly-ubiquitination. Over-expression of TRIM4 enhances virus-triggered activation of transcription factors IRF3 and NF-kappaB, as well as IFN-beta induction. Expression of TRIM4 differs significantly in Huntington's Disease (HD) neural cells when compared with wild-type controls, possibly impacting down-regulation of the Huntingtin (HTT) gene, which is involved in the regulation of diverse cellular activities that are impaired in Huntington's Disease (HD) cells.
Statistics
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PSSM-Id: 293981
Aligned: 15 rows
Threshold Bit Score: 399.977
Created: 13-Nov-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ELK06961     279 FQVVVSPAIDTAHpKLIFSQEgRYVKNGASASSWPlfSTAWNYFTGWKNPQQnthvlEKFQHLPCVLGKNVFtSGKHYWE 358  black flying fox
XP_850838    279 FQVAVSVAVDTAHpKLVFSQDgRYVKNGASASSWPlfSSAWSYVSGWRNPQKnaefvERFQHLPCVLGKNVFiSGRHYWE 358  dog
XP_007074090 192 FQVAVNLAEDTAHpKLVFSQEgRYVKNGASASSWPlfSSAWDYVSGWRTPPKttqsvERFQHLPCVLGKNVFtSGKHYWE 271  Amur tiger
XP_008581675 279 FQVAVNLAEDTAHpKLVISQEgRYVKNGASAGSLPvfSTAWNYFSGWRNPQKtthveERFQHLPCVLGKNVFtSGKHYWE 358  Sunda flying l...
XP_007187091 246 FQVAVNLAEDTAYpNLVFSQEgRYVKNGASASSWPlfSTAWSYFTGWRNPQRttdfvERFQHLPCVLGKNVFtSGKHYWE 325  Balaenoptera a...
XP_002721922 280 FQVAVSLAEDTAHpKLIISQEgRYVKNGAPASYRPvfSTAWSYFTGWRTPQNntqfaERFQHLPCVLGKNVFtSGKHYWE 359  rabbit
XP_008060944 136 FQVAVSLAEDTAHpKLVFSQEgRCVKNAASASTWPvfSTAWNYFAGWRNSQTstqfaEKFQYLPCVLGKNVFtSGKHYWE 215  Philippine tar...
EQB77916     482 FQVAVNVAEDTAHpKLIFSQEgKYVKNGASASSWPllSTAWSYVTGWRNPQKttgfvERFQHLPCVLGKTVFtSGKHYWE 561  Wild Bactrian ...
XP_006150203 278 FQVTVTLAEDTAHpKLVFAQEgRYVKNAAPAGSWPvfSTAWNYFSGWRNPQNsk--eEKFQYLPCVLGKNVLtSGKHYWE 355  Chinese tree s...
XP_008696720 176 FQVAVSVVEDTAHpKLVFSQGgRYVKNGASASSWPlfSSAWSYVSGWRNSQNtq-fvGRFQHLPCVLGKNIFtSGKHYWE 254  polar bear
ELK06961     359 VESRDSLEIAVGVCREDIMGIasssemcPNEGIWAICWSsAGYRPLTgssvssiRQEPALHRVGVFLDHGaGDISFYSAV 438  black flying fox
XP_850838    359 VENRDSLEIAVGVCREDVMGLadgskmsPHVGIWAICWSsAGFWPLTsspvsptKQEPALHRVGVFLDSGaGDISFYSAV 438  dog
XP_007074090 272 VESRDSLEIAVGVCREDIMGIvdsskmsPHVGIWALCWSsAGYRPLIsfsvsptKQEPALHRVGVFLDHEaGDISFYSAV 351  Amur tiger
XP_008581675 359 VESKDNLEIAVGVCREDVMGItdsskisPHVGIWAIYWSsAGYRPLTslpviptNQESPLHRVGVYLDHGaGNVSFYSAV 438  Sunda flying l...
XP_007187091 326 VEHQGSLEVAVGLCREDIMGItggstlsPRMGIWALCWSsAGYWPLTgisvrptKLEPALHRVGVFLDHRaGEISFYSAV 405  Balaenoptera a...
XP_002721922 360 VESKDSLEIAVGVCREDVMGItdnselsPHMGIWVIYWNsDGYRPLTslpiipvKQESSLHRVGVYLDHGaGNVSFYSAV 439  rabbit
XP_008060944 216 VETRDGLEIAMGVCREDVMGItdrsrmsPNVGIWAIYCSsGGYRPLTslsgiptKQEPALQRVGVYLDHGaGNVSFYSVV 295  Philippine tar...
EQB77916     562 VESRDGLEIAVGVCREDVMGItdgsrmsPELGIWALCWSsAGFRPLTsspvsptKPEPAPHRVGVFLDHGaGEISFYSAA 641  Wild Bactrian ...
XP_006150203 356 VERRDGLEIAAGVCREDVMGItsnseisPHMGIWAIYWSgAGYRPATsss--vtMQEPAPHRVGIYLDHEaGSVSFYSAV 433  Chinese tree s...
XP_008696720 255 VENRDSLEIAVGVCRGDVMGLadgsemcPHVGIWALSWGsAGYRPLTsspvsptKQEPALQRVGVFLDSDaGDISFYSAV 334  polar bear
ELK06961     439 DGVHLHTFSCplvSRLRPFFWLSPLASLVIP 469  black flying fox
XP_850838    439 DGTHLHTFSCplvSRLRPFFWLSPLASLVIP 469  dog
XP_007074090 352 DGAHLHTFSCphvSCLRPFFWLSPLASLVIP 382  Amur tiger
XP_008581675 439 DGVHLHTFSCsfvSRLRPFFWLSPLAYLVLP 469  Sunda flying lemur
XP_007187091 406 DGEHLYTFSCpsiSRLRPFFWLSPLASLVIP 436  Balaenoptera acutorostrata scammoni
XP_002721922 440 DGVHLHTFSFpfvSRLRPFFWLSPLASLVIP 470  rabbit
XP_008060944 296 DGVHLHTFSFslvSRVRPFFWLSPLASLVIL 326  Philippine tarsier
EQB77916     642 DGAHLHTFSCp-vSRLRPFFWLSPLASLVLP 671  Wild Bactrian camel
XP_006150203 434 DGVHLYTFSCs-vSRLRPFFWLSPLASLVIP 463  Chinese tree shrew
XP_008696720 335 DGTHLHTFSCplaSRLRPFFWLSPLASLVIP 365  polar bear
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