4R7R


Conserved Protein Domain Family
CPF_1278_like

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cd15786: CPF_1278_like 
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Uncharacterized protein conserved in Clostridia
This protein appears to be a member of a somewhat larger structural family conserved in Firmicutes. The 3D structure is available for one protein, CPF_1278, which has been labelled a putative lipoprotein. CPF_1278 displays structural similarity to the N-terminal domain of YycH, which plays a role in signal transduction and is found immediately downstream of the essential histidine kinase YycG. YycG forms a two-component system together with its cognate response regulator YycF. YycH functions as a modulator of YycG activity, possibly by interacting with YchI. All three molecules (YchG, YchH, and YchI) have been characterized as membrane proteins, and they may be able to form homodimers.
Statistics
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PSSM-Id: 276947
Aligned: 26 rows
Threshold Bit Score: 108.844
Created: 26-Sep-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4R7R_A         4 KPSLNYHTKNLSELV-SKNNIKIRLLDXNIYSEVIVDN-EDVRIIDDLLKSLKDSNFINEEa---lPNKPLYKIFIDLNS 78  Clostridium per...
WP_029450848   1 KPSNHFYTENLFNSLnEYKEFSSTLYETNLHKESSLNK-EDMEVLTNFFSSLNTNDFIDEPyg--iDKSPSYKIFITINS 77  Clostridium alg...
WP_027639125  33 KPNIYYYTQNLCSLIdKTDDFSVVLFQSDLHKQIDITK-EAVPVLKNFINDIKAEDFIDKPng--iPEIPPYKLFITIDN 109 Clostridium cad...
WP_021876113  33 KPTPYFYTEEIYTKLvNKESYTLKIFDLNVYKYYDVNP-EEHSILLEFIESLKESSYDTTLe---eNIKPRYKLIIEFEN 108 Clostridium cha...
ETI88976      33 KPNNHYYTDELKNKIlNNEKFSLSVFDTNLYKEIPVNK-DEFVIIDNFLTSISSDNYLQYDsk--pDAKEIYRITISFDD 109 Clostridium but...
WP_021802818  33 KPSNDYYTQELNNALnSSEDFSLVVFDSNYYKQMPVDD-EDKKSFKSFLKSIKDENFTEEAid--sSKKCLFRVYVTIDN 109 Clostridium int...
ACD52523      33 KPNNHYYTDQLTKKIlSNEEFSLYVFDKNLYKEIQVNE-NEEIIIDNFLNSLITENYLDTSds--iSDREPFRIKVVFKD 109 Clostridium bot...
WP_022167298  32 KPTTYYYSDELYSKLkENPSFTLQVFDCVLYKYYDVPK-EDYDIAESFLTSLRTENYLTELpdkykKSKPQYRLIISLGS 110 Clostridium sp....
WP_027096719  32 KSSPDFYTKEIYSKLlNDEEYSIELFNTNFYKNVPINKeEDNDIIENFIRSLSKDNYKTDGti--pEEKEPYQLKITFDD 109 Clostridium par...
WP_024613551  34 NQRGNYYYTEIKEKLsNKESYTLQVFDTNLYKYFPVDE-EDNIIIKNFINSLNNNNFLEEApn-dfKSKEKFRLIITFKD 111 Clostridium sp....
4R7R_A        79 -----EKYVIDIYGDDLITLYPWDSDVRKDYLSLKDIP-NSFKLEPFCQYVFN 125 Clostridium perfringens ATCC 13124
WP_029450848  78 -----MKYVINIYDADFISIYPWDGNKQMDFISMKNIP-VAYNLYSFCKYKID 124 Clostridium algidicarnis
WP_027639125 110 -----VRYVVNIYNDSILSVHTWDGIFKEDFLTMKDVH-AAYNLYGLCKYIFT 156 Clostridium cadaveris
WP_021876113 109 -----AKYVINAFNDKQISVYPWDGIYKEDIITMEDVP-AYYNLYKFCEYIEK 155 Clostridium chauvoei
ETI88976     110 -----FKYLIRVYDSSIVAISPWDGNYQEDIISMENIP-LRYNLLDFCNHIQN 156 Clostridium butyricum 60E.3
WP_021802818 110 -----TKYQIKVFQDEYVSIAPWDGVFKEDVLKEESIP-LGNKLTTFCNYILD 156 Clostridium intestinale
ACD52523     110 -----TIFLLKIFSSNLVTLSPWDGNYTEDIISMENLP-IGYNLFDFCVHVES 156 Clostridium botulinum E3 str. Alaska E43
WP_022167298 111 -----SKYIINAYSTELDTIHPYDGSFQEDIIDSTKNVdARNNIYDFCVYVAN 158 Clostridium sp. CAG:221
WP_027096719 110 -----SKYVIKIYSNSIVTVSPWDGIYPEDIINIEDVP-NRYNLFDFCSHIEH 156 Clostridium paraputrificum
WP_024613551 112 nnnneCKYIFKIYNNKFTKLHPFDGRVSEDIINMEDIP-LHYNLYDFCTYVQN 163 Clostridium sp. Ade.TY
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