1VFY


Conserved Protein Domain Family
FYVE_scVPS27p_like

?
cd15760: FYVE_scVPS27p_like 
Click on image for an interactive view with Cn3D
FYVE domain found in Saccharomyces cerevisiae vacuolar protein sorting-associated protein 27 (scVps27p) and similar proteins
scVps27p, also termed Golgi retention defective protein 11, is the putative yeast counterpart of the mammalian protein Hrs and is involved in endosome maturation. It is a mono-ubiquitin-binding protein that interacts with ubiquitinated cargoes, such as Hse1p, and is required for protein sorting into the multivesicular body. Vps27p forms a complex with Hse1p. The complex binds ubiquitin and mediates endosomal protein sorting. At the endosome, Vps27p and a trimeric protein complex, ESCRT-1, bind ubiquitin and are important for multivesicular body (MVB) sorting. Vps27p contains an N-terminal VHS (Vps27/Hrs/STAM) domain, a FYVE domain that binds PtdIns3P, followed by two ubiquitin-interacting motifs (UIMs), and a C-terminal clathrin-binding motif.
Statistics
?
PSSM-Id: 277299
Aligned: 42 rows
Threshold Bit Score: 66.9368
Created: 1-May-2013
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
Zn binding siteputative
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C C H C CClick to see conserved feature residue pattern help
Evidence:
  • Structure:1VFY; Saccharomyces cerevisiae Vps27p binds two Zn2+ ions through its FYVE domain.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                 #    #               #  #    #  #                    #  # 
1VFY_A          7 DWIDS-DACm--ICSKKFsl---lnRKHHCRSCGGVFCQEHSSNSIPLpdlg--iyePVRVCDSCF 64   baker's yeast
EGZ05690      226 KFKNDtTCCh-pGCHVRFdst--gkRQHHCRNCGGSVCSDHSSRFAMLrhfh--mnhPVRLCMGCY 286  Phytophthora sojae
EGZ17093      198 RWALA-SRCr--LCAAKFgy---frQRHHCRSCGASVCGRHSRHRVPLkhlg--lfqPQRVCACCF 255  Phytophthora sojae
XP_002176628    3 QWCEA-ESCh--ECRKVFgp---trLRHHCRLCGHSYCQAHSSLQHRLphlgydpnvPERVCGRCK 62   Phaeodactylum tricornutum C...
EJK44834      382 QWENA-GSCy--ACDRSFsp---tlHRHHCRRCGHSFCNLHANSSHVLahlgydpevPERVCLRCK 441  Thalassiosira oceanica
CBJ27220      463 RFEMK-PKCr--ECGEDFgv---trYRHHCRHCGGSFCHEHAWHEHPIpklg--lpaPQRVCTPCK 520  Ectocarpus siliculosus
CCA14695      192 KFENQ-NICshpNCGVKFdgktstkRQHHCRNCGQTVCSYHSQRFISLlhys--kskAVRTCTRCF 254  Albugo laibachii Nc14
EWM24606      214 PFRKR-DRCk--KCHKAFgv---trYRHHCRHCGESFCQEHSAFRHAIpkvg--ymvPARVCGACK 271  Nannochloropsis gaditana
ETV97907       17 PWQYA-STCh--ACRRPFgl---fsSRHHCRNCGHSVCAVHSKYKVELpll----kgPQRVCNQCH 72   Aphanomyces invadans
ETV73287      158 RWKEK-PMCg--LCFTAFsi---vnRRHHCRRCGESVCSTHSKHKGHVlggg--lhdLARICDRCH 215  Aphanomyces astaci

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap