Conserved Protein Domain Family
FYVE_FGD6

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cd15743: FYVE_FGD6 
FYVE domain found in FYVE, RhoGEF and PH domain-containing protein 6 (FGD6) and similar proteins
FGD6, also termed zinc finger FYVE domain-containing protein 24 is a putative Cdc42-specific guanine nucleotide exchange factor (GEF) whose biological function remains unclear. It is a homologue of FGD1 and contains a DBL homology (DH) domain and pleckstrin homology (PH) domain in the middle region, a FYVE domain, and another PH domain in the C-terminus, but lacks the N-terminal proline-rich domain (PRD) found in FGD1. Moreover, the FYVE domain of FGD6 is a canonical FYVE domain, which has been found in many proteins involved in membrane trafficking and phosphoinositide metabolism, and has been defined by three signature sequences: an N-terminal WxxD motif (x for any residue), the central basic R(R/K)HHCR patch, and a C-terminal RVC motif, which form a compact phosphatidylinositol 3-phosphate (PtdIns3P or PI3P)-binding site.
Statistics
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PSSM-Id: 277282
Aligned: 11 rows
Threshold Bit Score: 133.331
Created: 1-May-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Conserved Features/SitesClick to see Conserved Features Help
 
putative Znputative
Feature 1: putative Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens EEA1 (1JOC) binds two Zn2+ ions through its FYVE domain.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                    #  #            #  #    #  #                 #  # 
Q6ZV73       1217 PIWIPDTRATMCMICTSEFTLTWRRHHCRACGKIVCQACSSNKYGLDYLKNQPARVCEHCF 1277 human
AAH68913      254 PIWIPDGRVTMCMICTSEFTLTWRRHHCRACGKIICQACSTNKHSLEYLKNHLARVCDRCF 314  African clawed frog
NP_001093450 1113 PIWIPDLRTTMCMICTCEFTLTWRRHHCRACGKVVCQACSSNKFYLEYLKNQLARVCDHCY 1173 zebrafish
EMC77884     1212 PIWIPDTRATMCMICTSEFTLTWRRHHCRACGKIVCQACSSNKHGLDYMKNQPARVCDHCF 1272 domestic pigeon
XP_795610     140 PLWIPDSRVTMCMICTSEFTMTWRRHHCRACGKVTCGSCSKNKATLMYLSDKEARVCDNCY 200  purple urchin
EKC30931     1270 PIWIPDTRVTMCMICTSEFSVTWRRHHCRACGRVVCSNCSDNRAPLEYLRNKSVRVCEECF 1330 Pacific oyster
XP_002606715  360 PVWIPDSRVTMCMGCTCDFTVTWRRHHCRACGKVVCGTCSANRAPLQYLDYKAVRVCEECY 420  Florida lancelet
EFX67223     1064 PVWIPDSRVTMCQLCTAAFSITFRRHHCRACGKVVCRSCSSRKAGLEYLKFRSARVCDDCF 1124 common water flea
XP_001945183  636 PIWIQDCRVTMCQSCASEFTVTFRRHHCRACGKVVCSSCSENKAPLRYMKFQSARVCDDCY 696  pea aphid
XP_001640295  339 PVWIPDARVTMCMLCTDDFTVTNRRHHCRGCGKVVCGSCSDNLAPLTYLDYAQARVCDMCY 399  starlet sea anemone
ELT96558      252 PVWIPDARVSMCMTCTSEFTVTFRRHHCRACGKVVCGFCSDCKAPLRYLMYKPARVCQECF 312  Capitella sp. I Grassle & Grassl...

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