Conserved Protein Domain Family
ePHD_JADE

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cd15671: ePHD_JADE 
Extended PHD finger found in protein Jade-1, Jade-2, Jade-3 and similar proteins
The extended plant homeodomain (ePHD) zinc finger is characterized as Cys2HisCys5HisCys2His. This model includes the ePHD finger of Jade-1 (PHF17), Jade-2 (PHF15), and Jade-3 (PHF16); each of these proteins is required for ING4 and ING5 to associate with histone acetyltransferase (HAT) HBO1 and EAF6 to form a HBO1 complex that has a histone H4-specific acetyltransferase activity, has reduced activity toward histone H3, and is responsible for the bulk of histone H4 acetylation in vivo. This family also contains Drosophila melanogaster PHD finger protein rhinoceros (RNO). It is a novel plant homeodomain (PHD)-containing nuclear protein that may function as a transcription factor that antagonizes Ras signaling by regulating transcription of key EGFR/Ras pathway regulators in the Drosophila eye. All Jade proteins contain a canonical PHD finger followed by this non-canonical ePHD finger, both of which are zinc-binding motifs.
Statistics
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PSSM-Id: 277141
Aligned: 11 rows
Threshold Bit Score: 209.607
Created: 5-Mar-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteputative
Feature 1: Zn binding site [ion binding site], 12 residue positions
Conserved feature residue pattern:C C H C C C C C H C C HClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structure evidence that human Borjeson-Forssman-Lehmann syndrome-associated protein PHF6 (PDB 4NN2) binds three Zn2+ ions through its ePHD finger
  • Comment:The extended PHD finger is characterized by Cys2HisCys5HisCys2His.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #  #                 #  #                                #  #         #    #    
Q6IE81        258 CLLCPKKGGAMKptrsGTKWVHVSCALWIPEVSIgSPEKMEPITKVSHIPSSRWALVCSLCNEKfGASIQCSvKNCRTAF 337  human
Q92613        255 CVLCPKKGGALKttktGTKWAHVSCALWIPEVSIaCPERMEPITKISHIPPSRWALVCNLCKLKtGACIQCSiKSCITAF 334  human
Q7YZH1        367 CVLCPNKGGAMKsnksGKHWAHVSCALWIPEVSIgCVDRMEPITKISSIPQSRWSLICVLCRKRvGSCIQCSvKPCKTAY 446  fruit fly
Q9NQC1        254 CLLCPKRGGALKptrsGTKWVHVSCALWIPEVSIgCPEKMEPITKISHIPASRWALSCSLCKECtGTCIQCSmPSCVTAF 333  human
ESN93343      258 CALCTTQGGAMKstkdGSQWAHLSCALWVPEVTIaCSDKMEPIDNIDDIPMTRWNLICCVCKERsGACIQCCvKKCKTSF 337  Helobdella ro...
XP_001641778  192 CKLCSACGGAMKkakgGKTYIHVSCALWVPEVGFgNVERMEPIIKVEKIPTSRWNLVCYLCKEKvGACIQCSvKSCVTAF 271  starlet sea a...
XP_002166213  114 CYLCPNNGGAMKrlkdSYEWVHVMCAWWIPEVKI-EDSKYVERITIDKIPMKRWSLSCEICHVKkGACIQCTvKRCVRAY 192  Hydra vulgaris
ESO04614      257 CVLCPMSGGAMKctkgGDKWAHISCALWVPEVSIgCPEKMEPITNISQIPVSRWALVCVLCRDRtGACIQCSiKSCKTSF 336  Helobdella ro...
Q803A0        251 CHLCPKKGGAMKptrsGTKWVHVSCALWIPEVSIgNPEKMEPITNVSHIPSNRWALICCLCKEKtGACIQCSaKSCRVAF 330  zebrafish
CDS17182      196 CALCPNKGGAMKliddYRSWCHVSCALWVPEVSFqDVDLMEPITNINGIPQARKNLVCVLCKIHyGAPIQCSvKKCKVAF 275  Echinococcus ...
XP_002598163  285 CLLCPKKGGAMKstrsGTKWCHVSCALWVPEVSIgVPEKMEPVCKISQIPPSRWDLICCLCRERtGAPIQCVvTTCKVAF 364  Florida lancelet
Feature 1         #  #                          #  #
Q6IE81        338 HVTCAFDRGLEMktil---aenDEVKFKSYCPKH 368  human
Q92613        335 HVTCAFEHGLEMktil---degDEVKFKSYCLKH 365  human
Q7YZH1        447 HVTCAFQHGLEMraiieegnaeDGVKLRSYCQKH 480  fruit fly
Q9NQC1        334 HVTCAFDHGLEMrtil---adnDEVKFKSFCQEH 364  human
ESN93343      338 HVTCGFKMNYHMklnl--edndKELQFKAYCGAH 369  Helobdella robusta
XP_001641778  272 HVTCGFQEGLDMrtild-dtevDGVRHVSYCSKH 304  starlet sea anemone
XP_002166213  193 HITCAAKEGLELktvi--vpekDDVHHISFCSKH 224  Hydra vulgaris
ESO04614      337 HVTCAFKYSLNLstvi--deetEDVQMKAFCPKH 368  Helobdella robusta
Q803A0        331 HVTCGLHCGLKMntil---teaDEVKFKSFCPKH 361  zebrafish
CDS17182      276 HVTCAFQHNMTMiqe----lsgYDVRLLGHCPKH 305  Echinococcus granulosus
XP_002598163  365 HVTCAFQNGLEMktvl--egpdEEVKFKSYCPKH 396  Florida lancelet

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