Conserved Protein Domain Family
ePHD_PHF7_G2E3_like

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cd15669: ePHD_PHF7_G2E3_like 
Extended PHD finger found in PHD finger protein 7 (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase (G2E3)
The extended plant homeodomain (ePHD) zinc finger is characterized as Cys2HisCys5HisCys2His. This model includes the ePHD finger of PHF7 and G2E3. PHF7, also termed testis development protein NYD-SP6, is a testis-specific PHD finger-containing protein that associates with chromatin and binds histone H3 N-terminal tails with a preference for dimethyl lysine 4 (H3K4me2). It may play an important role in stimulating transcription involved in testicular development and/or spermatogenesis. PHF7 contains a PHD finger and a non-canonical ePHD finger, both of which may be involved in activating transcriptional regulation. G2E3 is a dual function ubiquitin ligase (E3) that may play a possible role in cell cycle regulation and the cellular response to DNA damage. It is essential for prevention of apoptosis in early embryogenesis. It is also a nucleo-cytoplasmic shuttling protein with DNA damage responsive localization. G2E3 contains two distinct RING-like ubiquitin ligase domains that catalyze lysine 48-linked polyubiquitination, and a C-terminal catalytic HECT domain that plays an important role in ubiquitin ligase activity and in the dynamic subcellular localization of the protein. The RING-like ubiquitin ligase domains consist of a PHD finger and an ePHD finger.
Statistics
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PSSM-Id: 277139
Aligned: 23 rows
Threshold Bit Score: 136.996
Created: 26-Mar-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteputative
Feature 1: Zn binding site [ion binding site], 12 residue positions
Conserved feature residue pattern:C C H C C C C C H C C HClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structure evidence that human Borjeson-Forssman-Lehmann syndrome-associated protein PHF6 (PDB 4NN2) binds three Zn2+ ions through its ePHD finger
  • Comment:The extended PHD finger is characterized by Cys2HisCys5HisCys2His.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #  #                          #  #                                        #  #  
Q7L622        14 CVFCRkhddcpNKYGEkktk---ekwnLTVHYYCLLMSSGIwqrgkeeegvyGFLIEDIRKEv----nRASKLKCcVCKK 86  human
EMC88344       1 CLLCRradadpNLCGLlle-----aqgLCAHLYCLLFANELfqrqpnnnglmGFLPEDIRHIv----eQAAQKDCfVCSE 71  rock pigeon
XP_005516845  84 CVLCRraeadpDICGDkle-----kygLYAHLFCLYFATLLfrqankrvgllGFLHQDIQLAv----rRAAQKHCcVCGQ 154 Tibetan ground-tit
XP_005048903  13 CMLCHrtqadtDICGDktv-----kfqLCVHTYCQILATGLfpqe----dtgHFLTEDTRHVi----rEAAKKSCfICCK 79  collared flycat...
XP_425998     16 CMLCGqtdadpDICGSkql-----dfgMCAHAFCMAFSNGLfqqativgrtaEVSPEDVQRVv----rEAERKHCfICGE 86  chicken
XP_004951089  18 CVLCVqgdadpDIYGRkvi-----ingIYFHEFCMIFSGGLlqaartqggneSLSMPDTIFAi----kQAEQTHCfVCGK 88  chicken
EOA99399       3 CVLCHrsdtslDGCGPmlq-----vdgVCAHVHCLVSSPRLpapfp-kplpgTWSPQDLAPAtsltglLCSLQRCcVCRK 76  mallard
Q7PZ79        54 CDICLlnennpLRYGEfvekvyktqrkIRAHYFCLLSGTNIpqngstpagiaGFKISDVLSSy----aEYREKQCyYCRH 129 Anopheles gambi...
NP_608374      5 CVLCLsgerdeLIFGTvhv-----egnMMVHRNCLYLSSNLiqrgekklsimNFLKEDIEAEv----nRCRLLKCcYCRR 75  fruit fly
XP_004536378   3 CELCDssrqdeIQFGSfli-----rydKAAHLNCLILSYGLkqrgsdnvdfnGYLFSDVSSRr----rYFYKQSCcYCNE 73  Mediterranean f...
Feature 1              #    #    #  #                 #  #
Q7L622        87 NGASIGCvaprCKRSYHFPCGLQRECifQFTGNFASFCWDH 127 human
EMC88344      72 SGATITCqergCNRSFHFPCALEGECvtQFFPQYRSYCWEH 112 rock pigeon
XP_005516845 155 SGATILCwkedCNRWFHLPCAKEGGCitQYIAPYRTYCPEH 195 Tibetan ground-tit
XP_005048903  80 MGASITCchasCQRTFHLPCAPDGECvtQYFGAYRSFCWEH 120 collared flycatcher
XP_425998     87 TGAPITCaeagCEHSFHLPCAREGDCvtQYFGEYSSFCQKH 127 chicken
XP_004951089  89 RGAFITCaetgCDRSFHLPCASEGECvtQYFEQYRSFCWEH 129 chicken
EOA99399      77 KGATVACwqkrCSRRFHLPCSSQRGCisQFFGDYSSFCWEH 117 mallard
Q7PZ79       130 PSAPVECaqagCGRRYHYICGYNNSCvtQFVGEFRSYCDQH 170 Anopheles gambiae str. PEST
NP_608374     76 LGANIWCcksgCRRTFHTKCGVDNLAqnQFCDTYNSFCHQH 116 fruit fly
XP_004536378  74 RYANLKCankhCQRLFHFICGIENRArnQYVKPYFSYCNQH 114 Mediterranean fruit fly

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