Conserved Protein Domain Family
PHD4_NSD2

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cd15657: PHD4_NSD2 
PHD finger 4 found in nuclear SET domain-containing protein 2 (NSD2)
NSD2, also termed histone-lysine N-methyltransferase NSD2, or multiple myeloma SET domain-containing protein (MMSET), or protein trithorax-5 Wolf-Hirschhorn syndrome candidate 1 protein (WHSC1), is overexpressed frequently in the t(4;14) translocation in 15% to 20% of multiple myeloma. It plays important roles in cancer cell proliferation, survival, and tumor growth, by mediating constitutive NF-kappaB signaling via the cytokine autocrine loop. It also enhances androgen receptor (AR)-mediated transcription. The principal chromatin-regulatory activity of NSD2 is dimethylation of histone H3 at lysine 36 (H3K36me2). NSD2 contains a catalytic suppressor of variegation, enhancer of zeste and trithorax (SET) domain, two proline-tryptophan-tryptophan-prolin motif (PWWP) domains, a high mobility group (HMG) box, five PHD (plant-homeodomain) zinc fingers, and an NSD-specific Cys-His rich domain (Cys5HisCysHis). The SET domain is responsible for histone methyltransferase activity. The PWWP, HMG, and PHD fingers mediate chromatin interaction and recognition of histone marks. This model corresponds to the fourth PHD finger.
Statistics
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PSSM-Id: 277127
Aligned: 5 rows
Threshold Bit Score: 90.0636
Created: 13-Aug-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteputative
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C [CH] H [CH] C [CH]Click to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #        #  #    #  #           #  # 
O96028        833 WCFVCSKGGSLLCCESCPAAFHPDCLNIEMPDGSWFCNDCR 873  human
AAI71696      925 WCFICSKGGRLLCCESCPAAFHPDCLNIAMPDGSWFCNDCR 965  zebrafish
AAI61082      777 WCFVCSNGGSLLCCESCPAAFHPDCLNIEMPDGSWFCNDCR 817  western clawed frog
EMP39387      871 WCFVCSKGGSLLCCESCPAAFHPDCLNIEMPDGSWYCNDCR 911  green sea turtle
XP_006004824  901 WCFVCSKGGSLLCCESCPAAFHPDCLNIEMPDGSWYCNDCR 941  coelacanth

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