Conserved Protein Domain Family
PHD1_NSD3

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cd15649: PHD1_NSD3 
PHD finger 1 found in nuclear SET domain-containing protein 3 (NSD3)
NSD3, also termed histone-lysine N-methyltransferase NSD3, or protein whistle, or WHSC1-like 1 isoform 9 with methyltransferase activity to lysine, or Wolf-Hirschhorn syndrome candidate 1-like protein 1 (WHSC1-like protein 1, or WHSC1L1), is a lysine methyltransferase encoded by gene NSD3, which is amplified in human breast cancer cell lines. Moreover, translocation resulting in NUP98 fusion to NSD3 leads to the development of acute myeloid leukemia. NSD3 contains a catalytic suppressor of variegation, enhancer of zeste and trithorax (SET) domain, two proline-tryptophan-tryptophan-prolin motif (PWWP) domains, five plant-homeodomain (PHD) zinc fingers, and an NSD-specific Cys-His rich domain (Cys5HisCysHis). The SET domain is responsible for histone methyltransferase activity. The PWWP and PHD fingers are involved in protein-protein interactions. This model corresponds to the first PHD finger.
Statistics
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PSSM-Id: 277119
Aligned: 6 rows
Threshold Bit Score: 72.8778
Created: 13-Aug-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteputative
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C [CH] H [CH] C [CH]Click to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #         #   #    #  #            #  # 
Q9BZ95        703 VCQICESSGDSLIPCEGECCKHFHLECLGlasLPDSKFICMECK 746  human
XP_005155379  813 VCHVCETFGDSLVSCEGDCNRLFHPECMGsnsGKESETVCQECK 856  zebrafish
EMC81514      693 VCQICESSGESLVSCEGECCGVFHPECLGlksLPDEKFICAECK 736  rock pigeon
XP_005812476  611 VCQVCEVAGEDLVACEGQCCGMFHLHCLGgtlKPDDKLLCQECS 654  southern platyfish
AAI71696      761 VCLVCEQTGEDIVTCAGQCYGTYHLHCIGv-eRSAEKILCTACS 803  zebrafish
XP_006000427  727 VCQICASFGESLVTCEGECYRLFHMECLGltaLPEGKFICIECK 770  coelacanth

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