1F62


Conserved Protein Domain Family
PHD_BAZ1B

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cd15628: PHD_BAZ1B 
Click on image for an interactive view with Cn3D
PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
BAZ1B, also termed Tyrosine-protein kinase BAZ1B, or Williams syndrome transcription factor (WSTF), or Williams-Beuren syndrome chromosomal region 10 protein, Williams-Beuren syndrome chromosomal region 9 protein, or WALp2, is a multifunctional protein implicated in several nuclear processes, including replication, transcription, and the DNA damage response. BAZ1B/WSTF, together with the imitation switch (ISWI) ATPase, forms a WSTF-ISWI chromatin remodeling complex (WICH), which transiently associates with the human inactive X chromosome (Xi) during late S-phase prior to BRCA1 and gamma-H2AX. Moreover, BAZ1B/WSTF, SNF2h, and nuclear myosin 1 (NM1) forms the chromatin remodeling complex B-WICH that is involved in regulating rDNA transcription. BAZ1B contains a WAC motif, a DDT domain, BAZ 1 and BAZ 2 motifs, a WAKZ (WSTF/Acf1/KIAA0314/ZK783.4) motif, a plant homeodomain (PHD) finger, and a bromodomain.
Statistics
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PSSM-Id: 277098
Aligned: 9 rows
Threshold Bit Score: 75.9361
Created: 9-Aug-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteputative
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C H C C CClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #           #  #    #  #              #  #
1F62_A          2 RCKVCRKKgeddKLILCDeCNKAFHLFCLRPALyevPDGEWQCPAC 47   human
A2BIL7       1204 RCKVCRRKgeddKLILCDeCNKAFHLFCLRPALyriPAGEWLCPAC 1249 zebrafish
A8DZJ1       1153 RCKVCRKKgeddKLILCDeCNKAFHLFCLRPVLfniPDGEWLCPAC 1198 African clawed frog
EMP30544     1379 RCKVCRKKgeddKLILCDeCNKAFHLFCLRPALyeiPDGEWQCPAC 1424 green seaturtle
ELT91900     1178 KCKICRKKgeeeKVLLCDdCNQPFHLYCLRPALyevPKGEWFCAAC 1223 Capitella sp. I Grassle & Grassle, 1976
XP_002591894 1187 KCKVCRKKgeeeRLLLCDeCNQAYHIFCLRPALscvPPGEWRCPAC 1232 Florida lancelet
XP_003729967 1447 KCKICRRKgnedKVIMCDkCNQPFHLFCLRPALpafPTGEWMCPAC 1492 purple urchin
XP_006813753 1223 KCKICRKKgdedKLLLCDeCNQPFHLYCLRPALsyvPKGDWMCPAC 1268 Saccoglossus kowalevskii
ESO97816     1085 KCKICRKKgnddRLLLCDdCNLAFHMYCLRPALtdvPEGEWFCAAC 1130 owl limpet

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