Conserved Protein Domain Family
PHD1_KMT2A

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cd15588: PHD1_KMT2A 
PHD finger 1 found in histone-lysine N-methyltransferase 2A (KMT2A)
KMT2A (also termed ALL-1, CXXC-type zinc finger protein 7, myeloid/lymphoid or mixed-lineage leukemia protein 1 (MLL1), trithorax-like protein (Htrx), or zinc finger protein HRX) is a histone methyltransferase that belongs to the MLL subfamily of H3K4-specific histone lysine methyltransferases (KMT2). It regulates chromatin-mediated transcription through the catalysis of methylation of histone 3 lysine 4 (H3K4), and is frequently rearranged in acute leukemia. KMT2A functions as the catalytic subunit in MLL1 complex, which also contains WDR5, RbBP5, ASH2L and DPY30 as integral core subunits required for the efficient methylation activity of the complex. The MLL1 complex is highly active and specific for H3K4 methylation. KMT2A contains a CxxC (x for any residue) zinc finger domain, three plant homeodomain (PHD) fingers, a Bromodomain domain, an extended PHD (ePHD) finger, Cys2HisCys5HisCys2His, two FY (phenylalanine tyrosine)-rich domains, and a SET (Suppressor of variegation, Enhancer of zeste, Trithorax) domain. This model corresponds to the first PHD finger.
Statistics
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PSSM-Id: 277063
Aligned: 4 rows
Threshold Bit Score: 117.747
Created: 13-Aug-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteputative
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C [CH] H [CH] C [CH]Click to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1       #  #          #  #    #  #                #  #
Q03164    1433 VCFLCASSGHVEFVYCQVCCEPFHKFCLEENERPlEDQLENWCCRRC 1479 human
EMC78314  1280 VCFLCASSGHVEFVYCQVCCEPFHKFCLEESERPlEDQLENWCCRRC 1326 domestic pigeon
AAI55711  1378 VCFLCASSGHVEFVYCQVCCEPFHRFCLEERERPsEDQIENWCCRHC 1424 western clawed frog
ABO41859  1560 VCFLCASSGNVEFVFCQVCCEPFHLFCLGEAERPhDEQWENWCCRRC 1606 zebrafish

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