3C6W,2PNX


Conserved Protein Domain Family
PHD_ING4_5

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cd15586: PHD_ING4_5 
Click on image for an interactive view with Cn3D
PHD finger found in inhibitor of growth protein 4 (ING4) and 5 (ING5)
ING4, also termed p29ING4, and ING5, also termed p28ING5, belong to the inhibitor of growth (ING) family of type II tumor suppressors. ING4 acts as an E3 ubiquitin ligase to induce ubiquitination of the p65 subunit of NF-kappaB and inhibit the transactivation of NF-kappaB target genes. It also induces apoptosis through a p53 dependent pathway, including increasing p53 acetylation, inhibiting Mdm2-mediated degradation of p53 and enhancing the expression of p53 responsive genes both at the transcriptional and post-translational levels. Moreover, ING4 can inhibit the translation of proto-oncogene MYC by interacting with AUF1. It also regulates other transcription factors, such as hypoxia-inducible factor (HIF). ING5 is a Tip60 cofactor that acetylates p53 at K120 and subsequently activates the expression of p53-dependent apoptotic genes in response to DNA damage. Aberrant ING5 expression may contribute to pathogenesis, growth, and invasion of gastric carcinomas and colorectal cancer. ING5 can physically interact with p300 and p53 in vivo, and its overexpression induces apoptosis in colorectal cancer cells. It also associates with cyclin A1 (INCA1) and functions as a growth suppressor with suppressed expression in Acute Myeloid Leukemia (AML). Moreover, ING5 translocation from the nucleus to the cytoplasm might be a critical event for carcinogenesis and tumor progression in human head and neck squamous cell carcinoma. Both ING4 and ING5 contain an N-terminal ING histone-binding domain and a C-terminal plant homeodomain (PHD) finger. They associate with histone acetyltransferase (HAT) complexes containing MOZ (monocytic leukemia zinc finger protein)/MORF (MOZ-related factor) and HBO1, and further direct the MOZ/MORF and HBO1 complexes to chromatin.
Statistics
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PSSM-Id: 277061
Aligned: 13 rows
Threshold Bit Score: 85.3179
Created: 12-Aug-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteH3K4me3 binding
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C H C C CClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         # #          #    #     #  #            #  #
3C6W_A        11 YCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRC 55  human
2PNX_A         7 YCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRC 51  human
NP_001007169 188 YCLCSQVSYGEMIGCDNSDCPIEWFHFACVGLATKPKGKWYCPRC 232 zebrafish
CBY31229     160 YCSCHQVSYGEMIGCDNPDCPIEWFHFGCVGLVQKPKGKWYCARC 204 Oikopleura dioica
XP_003385612 191 YCFCHQVSFGEMIGCDNTDCPIEWFHFQCVGLTSKPKGKWFCQRC 235 Amphimedon queenslandica
ESN91510     201 YCTCHQVSYGEMIGCDNPDCPIEWFHFGCVGLSTKPKGKWYCSRC 245 Helobdella robusta
NP_609647    234 YCLCHQVSYGEMIGCDNPDCPIEWFHFACVGLTTKPKGKWFCPKC 278 fruit fly
XP_002113450 187 YCLCHQVSYGEMIGCDNTECPIEWFHFQCVGLTTKPKGKWYCPKC 231 Trichoplax adhaerens
XP_002407397  99 YCLCHQVSYGEMIGCDNPDCPIEWFHFTCVGLTSKPKGKWFCPKC 143 black-legged tick
XP_002588507 204 YCLCHQVSYGEMIGCDNPDCPIEWFHFGCVGLTTKPKGKWFCPKC 248 Florida lancelet
XP_002732281 206 YCLCHQVSYGEMIGCDNPDCPIEWFHFACVGLTSKPKGKWYCPKC 250 Saccoglossus kowalevskii
XP_793913    195 YCLCHQVSYGEMIGCDNPDCPIEWFHFACVGLVTKPKGKWFCPKC 239 purple urchin
EKC39309     192 YCLCHQVSYGEMIGCDNPDCPIEWFHFACVGLTMKPKGKWFCPRC 236 Pacific oyster

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